Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing garR gene

Properties
Regulog: SdaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: SdaR
Regulation mode: activator
Biological process: Glucarate utilization; Galactarate utilization
Effector: Glycerate
Phylum: Proteobacteria/gamma
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -203
Score: 5.5751
Sequence: CGTTGTGCAAATGCTCAAAA
Locus tag: CKO_04523
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: CKO_04522
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: CKO_04521
Name: garK
Funciton: Glycerate kinase (EC 2.7.1.31)
garL-garR-garK -203 5.6 CGTTGTGCAAATGCTCAAAA CKO_04523
Enterobacter sp. 638
Position: -208
Score: 5.37345
Sequence: GGTTGTGCATATGCTCAAAT
Locus tag: Ent638_3569
Name: garP
Funciton: D-galactarate permease, MFS family
Locus tag: Ent638_3568
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: Ent638_3567
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: Ent638_3566
Name: garK
Funciton: Glycerate kinase (EC 2.7.1.31)
garP-garL-garR-garK -208 5.4 GGTTGTGCATATGCTCAAAT Ent638_3569
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -358
Score: 4.10233
Sequence: TGCTGGGCTATTGCCCAATG
Locus tag: ECA3576
Name: gudX
Funciton: Glucarate dehydratase related protein (EC 4.2.1.-)
Locus tag: ECA3575
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: ECA3574
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: ECA3573
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: ECA3572
Name: garK
Funciton: Glycerate kinase (EC 2.7.1.31)
gudX-gudD-garL-garR-garK -358 4.1 TGCTGGGCTATTGCCCAATG ECA3576
Escherichia coli str. K-12 substr. MG1655
Position: -186
Score: 5.98822
Sequence: TTATGTGCATATGCTCAAAA
Position: -144
Score: 4.50599
Sequence: AAATTAGCATTTGCACAATG
Locus tag: b3127
Name: garP
Funciton: D-galactarate permease, MFS family
Locus tag: b3126
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: b3125
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: b3124
Name: garK
Funciton: Glycerate kinase (EC 2.7.1.31)
garP-garL-garR-garK -186 6 TTATGTGCATATGCTCAAAA b3127
-144 4.5 AAATTAGCATTTGCACAATG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -206
Score: 4.69404
Sequence: CTTATGGCATAAGCACAATT
Locus tag: KPN_03539
Name: garP
Funciton: D-galactarate permease, MFS family
Locus tag: KPN_03538
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: KPN_03537
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: KPN_03536
Name: garK
Funciton: Glycerate kinase (EC 2.7.1.31)
garP-garL-garR-garK -206 4.7 CTTATGGCATAAGCACAATT KPN_03539
Salmonella typhimurium LT2
Position: -316
Score: 5.12915
Sequence: TCATGGGCGTATGCTCAAAA
Position: -273
Score: 4.77058
Sequence: TAATGAGCGTTTGCACAATG
Locus tag: STM3249
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: STM3248
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: STM3247
Name: garK
Funciton: Glycerate kinase (EC 2.7.1.31)
garL-garR-garK -316 5.1 TCATGGGCGTATGCTCAAAA STM3249
-273 4.8 TAATGAGCGTTTGCACAATG
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