Orthologous regulated operons containing iscR gene
| Regulog: | IscR - Clostridia-3 |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Blautia hansenii DSM 20583 | ||||
|
Position: -43
Score: 5.57175 Sequence: AGAAATCAGAGTAAAACAGTCGGAATTGA
Locus tag: BLAHAN_03017
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: BLAHAN_03016
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: BLAHAN_03015
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: BLAHAN_03014
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-iscS-iscU-trmU | -43 | 5.6 | AGAAATCAGAGTAAAACAGTCGGAATTGA | BLAHAN_03017 |
| Bryantella formatexigens DSM 14469 | ||||
|
Position: -53
Score: 6.20065 Sequence: AGAAATCCGAGTAATTTAGTAGGATTTAA
Locus tag: BRYFOR_01246
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: BRYFOR_01247
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: BRYFOR_01248
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: BRYFOR_01249
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-iscS-iscU-trmU | -53 | 6.2 | AGAAATCCGAGTAATTTAGTAGGATTTAA | BRYFOR_01246 |
| Clostridium nexile DSM 1787 | ||||
|
Position: -51
Score: 5.91229 Sequence: ATAAACCCTAGTAATTCACTAGGAATTAA
Locus tag: CLONEX_03012
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CLONEX_03011
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CLONEX_03010
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CLONEX_03009
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
||||
| iscR-iscS-iscU-trmU | -51 | 5.9 | ATAAACCCTAGTAATTCACTAGGAATTAA | CLONEX_03012 |
| Clostridium scindens ATCC 35704 | ||||
|
Position: 18
Score: 5.74359 Sequence: AGAAATCCTAGCAAATTGCTAGGAATTAA
Locus tag: CLOSCI_01399
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CLOSCI_01400
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CLOSCI_01401
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CLOSCI_01402
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
||||
| iscR-iscS-iscU-trmU | 18 | 5.7 | AGAAATCCTAGCAAATTGCTAGGAATTAA | CLOSCI_01399 |
| Dorea formicigenerans ATCC 27755 | ||||
|
Position: -37
Score: 4.69748 Sequence: TAAATCCCCAGTATTTTGCTAGGGATTGG
Locus tag: DORFOR_01426
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: DORFOR_01427
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: DORFOR_01428
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: DORFOR_01429
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-iscS-iscU-trmU | -37 | 4.7 | TAAATCCCCAGTATTTTGCTAGGGATTGG | DORFOR_01426 |
| Dorea longicatena DSM 13814 | ||||
|
Position: -43
Score: 5.39194 Sequence: AAAAATCCTAGTAAAATACTGGGGATTAA
Locus tag: DORLON_02444
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: DORLON_02443
Name: null Funciton: hypothetical protein
Locus tag: DORLON_02442
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: DORLON_02441
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: DORLON_02440
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-DORLON_02443-iscS-iscU-trmU | -43 | 5.4 | AAAAATCCTAGTAAAATACTGGGGATTAA | DORLON_02444 |
| Eubacterium rectale ATCC 33656 | ||||
|
Position: -45
Score: 5.32536 Sequence: TGAATGTATAGTAAAGCAGTAGGAAATGA
Locus tag: EUBREC_0307
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: EUBREC_0308
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: EUBREC_0309
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: EUBREC_0310
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-iscS-iscU-trmU | -45 | 5.3 | TGAATGTATAGTAAAGCAGTAGGAAATGA | EUBREC_0307 |
| Ruminococcus gnavus ATCC 29149 | ||||
|
Position: -60
Score: 4.49887 Sequence: GGAAATCCTAGTAAAACAATAGGGATTGG
Locus tag: RUMGNA_01751
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: RUMGNA_01752
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: RUMGNA_01753
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: RUMGNA_01754
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-iscS-iscU-trmU | -60 | 4.5 | GGAAATCCTAGTAAAACAATAGGGATTGG | RUMGNA_01751 |
| Ruminococcus lactaris ATCC 29176 | ||||
|
Position: -54
Score: 4.58676 Sequence: GAAAATCCTAGTACAATACTAGGGATAAT
Locus tag: RUMLAC_01913
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: RUMLAC_01914
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: RUMLAC_01915
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: RUMLAC_01916
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-iscS-iscU-trmU | -54 | 4.6 | GAAAATCCTAGTACAATACTAGGGATAAT | RUMLAC_01913 |