Orthologous regulated operons containing trmU gene

Properties
Regulog:	IscR - Clostridia-2
Regulator type:	Transcription factor
Regulator family:	Rrf2
Regulation mode:	repressor
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Phylum:	Firmicutes

Built upon 7 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Clostridium bartlettii DSM 16795
Position: -113 Score: 6.62147 Sequence: TTAATTCTGACTAAAATAGTCAAAATTAA Position: -88 Score: 5.73843 Sequence: TTAATGTTGACAAAAACACTCAAGTATAA Locus tag: CLOBAR_02189 Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR Locus tag: CLOBAR_02188 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7) Locus tag: CLOBAR_02187 Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like Locus tag: CLOBAR_02186 Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
iscR-iscS-iscU-trmU	-113	6.6	TTAATTCTGACTAAAATAGTCAAAATTAA	CLOBAR_02189
	-88	5.7	TTAATGTTGACAAAAACACTCAAGTATAA
Clostridium hiranonis DSM 13275
Position: -103 Score: 5.88657 Sequence: ACAAATCATACTAAAATAGTAGGAAATAA Position: -77 Score: 5.65314 Sequence: TAATACTTGACAAAAATAGTCGGATATAA Position: -43 Score: 6.01591 Sequence: TTAAACCATAGTAAAACAGTAGGAATTAA Locus tag: CLOHIR_01195 Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR Locus tag: CLOHIR_01196 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7) Locus tag: CLOHIR_01197 Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like Locus tag: CLOHIR_01198 Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
iscR-iscS-iscU-trmU	-103	5.9	ACAAATCATACTAAAATAGTAGGAAATAA	CLOHIR_01195
	-77	5.7	TAATACTTGACAAAAATAGTCGGATATAA
	-43	6	TTAAACCATAGTAAAACAGTAGGAATTAA