Orthologous regulated operons containing iscS gene
| Regulog: | IscR - Clostridia-2 |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Clostridium bartlettii DSM 16795 | ||||
|
Position: -113
Score: 6.62147 Sequence: TTAATTCTGACTAAAATAGTCAAAATTAA
Position: -88
Score: 5.73843 Sequence: TTAATGTTGACAAAAACACTCAAGTATAA
Locus tag: CLOBAR_02189
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CLOBAR_02188
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CLOBAR_02187
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CLOBAR_02186
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
||||
| iscR-iscS-iscU-trmU | -113 | 6.6 | TTAATTCTGACTAAAATAGTCAAAATTAA | CLOBAR_02189 |
| -88 | 5.7 | TTAATGTTGACAAAAACACTCAAGTATAA | ||
| Clostridium difficile 630 | ||||
|
Position: -98
Score: 5.95584 Sequence: TTAATCTTGACAAAATTAGTAGGGTATAA
Position: -53
Score: 5.38793 Sequence: GTAATTCCTACTAAAACAGTATGAATTAG
Locus tag: CD1278
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CD1279
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CD1280
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like |
||||
| iscR-iscS-iscU | -98 | 6 | TTAATCTTGACAAAATTAGTAGGGTATAA | CD1278 |
| -53 | 5.4 | GTAATTCCTACTAAAACAGTATGAATTAG | ||
| Clostridium hiranonis DSM 13275 | ||||
|
Position: -103
Score: 5.88657 Sequence: ACAAATCATACTAAAATAGTAGGAAATAA
Position: -77
Score: 5.65314 Sequence: TAATACTTGACAAAAATAGTCGGATATAA
Position: -43
Score: 6.01591 Sequence: TTAAACCATAGTAAAACAGTAGGAATTAA
Locus tag: CLOHIR_01195
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CLOHIR_01196
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CLOHIR_01197
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CLOHIR_01198
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
||||
| iscR-iscS-iscU-trmU | -103 | 5.9 | ACAAATCATACTAAAATAGTAGGAAATAA | CLOHIR_01195 |
| -77 | 5.7 | TAATACTTGACAAAAATAGTCGGATATAA | ||
| -43 | 6 | TTAAACCATAGTAAAACAGTAGGAATTAA | ||