Orthologous regulated operons containing iscS gene
| Regulog: | IscR - Clostridia-1 |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Clostridium beijerincki NCIMB 8052 | ||||
|
Position: -105
Score: 5.67628 Sequence: CAAAAGCCGAGTATTTTGGTAAGATATAA
Locus tag: Cbei_1097
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: Cbei_1098
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: Cbei_1099
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: Cbei_1100
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
||||
| iscR-iscS-iscU-trmU | -105 | 5.7 | CAAAAGCCGAGTATTTTGGTAAGATATAA | Cbei_1097 |
| Clostridium botulinum A str. ATCC 3502 | ||||
|
Position: -82
Score: 4.78731 Sequence: ATATTGTTGACAGGTTTAGTCTGATTTGC
Position: -43
Score: 6.02153 Sequence: ATAAATCATAGTAAAGTGGTCAACATTAA
Locus tag: CBO2569
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CBO2568
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CBO2567
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like |
||||
| iscR-iscS-iscU | -82 | 4.8 | ATATTGTTGACAGGTTTAGTCTGATTTGC | CBO2569 |
| -43 | 6 | ATAAATCATAGTAAAGTGGTCAACATTAA | ||
| Clostridium butyricum 5521 | ||||
|
Position: -61
Score: 5.25534 Sequence: CAATAGCCGAGTATTTTGATAAGATATAA
Locus tag: CBY_2622
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CBY_2621
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CBY_2620
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CBY_2619
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
||||
| iscR-iscS-iscU-trmU | -61 | 5.3 | CAATAGCCGAGTATTTTGATAAGATATAA | CBY_2622 |
| Clostridium kluyveri DSM 555 | ||||
|
Position: -71
Score: 5.76577 Sequence: TTATTGTTGACAAGTTTACTCTGATTTGA
Locus tag: CKL_1317
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CKL_1318
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CKL_1319
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like |
||||
| iscR-iscS-iscU | -71 | 5.8 | TTATTGTTGACAAGTTTACTCTGATTTGA | CKL_1317 |
| Clostridium novyi NT | ||||
|
Position: -82
Score: 5.91078 Sequence: TTAATGTTGACAAAAACACTCGGATTTGA
Position: -41
Score: 5.60115 Sequence: AGAATTCATAGTATAACACTCGGATTTAA
Locus tag: NT01CX_2284
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: NT01CX_2283
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: NT01CX_2282
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: NT01CX_2281
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-iscS-iscU-trmU | -82 | 5.9 | TTAATGTTGACAAAAACACTCGGATTTGA | NT01CX_2284 |
| -41 | 5.6 | AGAATTCATAGTATAACACTCGGATTTAA | ||
| Clostridium perfringens ATCC 13124 | ||||
|
Position: -80
Score: 5.82798 Sequence: TTATTGTTGACAAATTTACTCGGTTTTGA
Position: -39
Score: 5.03984 Sequence: ATAAAGTACATCGAATTAGTCAGATTTAG
Locus tag: CPF_2040
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CPF_2039
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CPF_2038
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CPF_2037
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
||||
| iscR-iscS-iscU-trmU | -80 | 5.8 | TTATTGTTGACAAATTTACTCGGTTTTGA | CPF_2040 |
| -39 | 5 | ATAAAGTACATCGAATTAGTCAGATTTAG | ||
| Clostridium tetani E88 | ||||
|
Position: -92
Score: 5.21816 Sequence: TTATAGTTGACAGGAATACTCGGATTTGT
Position: -52
Score: 5.49248 Sequence: TGAAAGTTTAGTAAAGCAGTAGACTTTCA
Locus tag: CTC01049
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CTC01050
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CTC01051
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CTC01052
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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| iscR-iscS-iscU-trmU | -92 | 5.2 | TTATAGTTGACAGGAATACTCGGATTTGT | CTC01049 |
| -52 | 5.5 | TGAAAGTTTAGTAAAGCAGTAGACTTTCA | ||