Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG456 (RimI), PF00583 gene

Properties
Regulog: PdxW2 - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine biosynthesis
Effector: Pyridoxal-5-phosphate
Phylum: Proteobacteria/Gamma
Built upon 6 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas aeruginosa PAO1
Position: -94
Score: 13.998
Sequence: ATTGGACCT-(15)-AATGGATCT-(5)-CGGACCATT
Locus tag: PA5432
Name: COG456 (RimI), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
Locus tag: PA5433
Name: COG1670 (RimL), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
COG456 (RimI), PF00583-COG1670 (RimL), PF00583 -94 14 ATTGGACCT-(15)-AATGGATCT-(5)-CGGACCATT PA5432
Pseudomonas entomophila L48
Position: -87
Score: 14.142
Sequence: ATTGGACCT-(15)-AATGGCTCT-(5)-AGAGCCAAT
Locus tag: PSEEN5492
Name: pdxO2
Funciton: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Locus tag: PSEEN5493
Name: COG456 (RimI), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
Locus tag: PSEEN5494
Name: COG1670 (RimL), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
pdxO2-COG456 (RimI), PF00583-COG1670 (RimL), PF00583 -87 14.1 ATTGGACCT-(15)-AATGGCTCT-(5)-AGAGCCAAT PSEEN5492
Pseudomonas fluorescens Pf-5
Position: -88
Score: 12.7822
Sequence: ATTGGACCC-(15)-GATGGCTCT-(5)-CGAACCATT
Locus tag: PFL_6149
Name: pdxO2
Funciton: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Locus tag: PFL_6150
Name: COG456 (RimI), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
Locus tag: PFL_6151
Name: COG1670 (RimL), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
pdxO2-COG456 (RimI), PF00583-COG1670 (RimL), PF00583 -88 12.8 ATTGGACCC-(15)-GATGGCTCT-(5)-CGAACCATT PFL_6149
Pseudomonas mendocina ymp
Position: -88
Score: 13.1826
Sequence: ATTGGCTCT-(15)-AATGGATCT-(5)-CAGGCCAAT
Locus tag: Pmen_0131
Name: pdxO2
Funciton: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Locus tag: Pmen_0132
Name: COG456 (RimI), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
Locus tag: Pmen_0133
Name: COG1670 (RimL), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
pdxO2-COG456 (RimI), PF00583-COG1670 (RimL), PF00583 -88 13.2 ATTGGCTCT-(15)-AATGGATCT-(5)-CAGGCCAAT Pmen_0131
Pseudomonas putida KT2440
Position: -86
Score: 14.3879
Sequence: ATTGGACCT-(15)-AATGGATCT-(5)-AGAACCAAT
Locus tag: PP5343
Name: pdxO2
Funciton: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Locus tag: PP5344
Name: COG456 (RimI), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
Locus tag: PP5345
Name: COG1670 (RimL), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
pdxO2-COG456 (RimI), PF00583-COG1670 (RimL), PF00583 -86 14.4 ATTGGACCT-(15)-AATGGATCT-(5)-AGAACCAAT PP5343
Pseudomonas syringae pv. tomato str. DC3000
Position: -87
Score: 13.3076
Sequence: ATTGGCTCT-(15)-AATGGATCT-(5)-CAGACCAAT
Locus tag: PSPTO5505
Name: pdxO2
Funciton: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Locus tag: PSPTO5506
Name: COG456 (RimI), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
Locus tag: PSPTO5507
Name: COG1670 (RimL), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
pdxO2-COG456 (RimI), PF00583-COG1670 (RimL), PF00583 -87 13.3 ATTGGCTCT-(15)-AATGGATCT-(5)-CAGACCAAT PSPTO5505