Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdD gene

Properties
Regulog: NrdR - Bifidobacteriaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Actinobacteria
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bifidobacterium adolescentis ATCC 15703
Position: -113
Score: 4.66462
Sequence: ACACTACATTTAGTGC
Locus tag: BAD_1216
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BAD_1215
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -113 4.7 ACACTACATTTAGTGC BAD_1216
Bifidobacterium angulatum DSM 20098
Position: -129
Score: 4.0327
Sequence: ACACTAGCCCTAGTGT
Position: -98
Score: 4.49552
Sequence: GAACTATATGTAGGGG
Locus tag: BIFANG_00874
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BIFANG_00875
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -129 4 ACACTAGCCCTAGTGT BIFANG_00874
-98 4.5 GAACTATATGTAGGGG
Bifidobacterium animalis subsp. lactis AD011
Position: -151
Score: 4.16114
Sequence: GCACAACATGTTGGTC
Position: -119
Score: 4.86322
Sequence: GTACTACATCTAGTGT
Locus tag: BLA_0521
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BLA_0520
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -151 4.2 GCACAACATGTTGGTC BLA_0521
-119 4.9 GTACTACATCTAGTGT
Bifidobacterium bifidum NCIMB 41171
Position: -124
Score: 5.23669
Sequence: CCACTATATCTAGGGG
Locus tag: BbifN4_010100001805
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BbifN4_010100001810
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -124 5.2 CCACTATATCTAGGGG BbifN4_010100001805
Bifidobacterium breve DSM 20213
Position: -174
Score: 3.90361
Sequence: CCACTATAAATAGTTC
Position: -142
Score: 5.08699
Sequence: ACACTAGATATAGGGG
Locus tag: BIFBRE_00457
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BIFBRE_00458
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -174 3.9 CCACTATAAATAGTTC BIFBRE_00457
-142 5.1 ACACTAGATATAGGGG
Bifidobacterium dentium Bd1
Position: -112
Score: 4.83701
Sequence: CTACTAGATATAGTGC
Locus tag: BDP_1694
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BDP_1693
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -112 4.8 CTACTAGATATAGTGC BDP_1694
Bifidobacterium gallicum DSM 20093
Position: -144
Score: 4.112
Sequence: CCACCATATCTAGTCA
Position: -113
Score: 4.46434
Sequence: GAACTAGATATAGGGG
Locus tag: BIFGAL_00567
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BIFGAL_00566
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -144 4.1 CCACCATATCTAGTCA BIFGAL_00567
-113 4.5 GAACTAGATATAGGGG
Bifidobacterium longum NCC2705
Position: -174
Score: 3.59348
Sequence: ACCCTATAAATAGTTC
Position: -142
Score: 5.0258
Sequence: GCACTAGATATAGGGG
Locus tag: BL1752
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BL1753
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -174 3.6 ACCCTATAAATAGTTC BL1752
-142 5 GCACTAGATATAGGGG
Bifidobacterium longum subsp. infantis ATCC 15697
Position: -174
Score: 3.59348
Sequence: ACCCTATAAATAGTTC
Position: -142
Score: 5.18622
Sequence: GCACTAGATATAGTGG
Locus tag: Blon_0612
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Blon_0613
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -174 3.6 ACCCTATAAATAGTTC Blon_0612
-142 5.2 GCACTAGATATAGTGG
Gardnerella vaginalis 409-05
Position: -148
Score: 4.13059
Sequence: TCACTATATATAGGTG
Position: -116
Score: 4.6652
Sequence: GCCCTAGATATTGTGC
Locus tag: HMPREF0424_1125
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: HMPREF0424_1124
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -148 4.1 TCACTATATATAGGTG HMPREF0424_1125
-116 4.7 GCCCTAGATATTGTGC
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