Orthologous regulated operons containing rbsB gene

Properties
Regulog:	RbsR1 - Bifidobacteriaceae
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Ribose utilization
Effector:	Ribose
Phylum:	Actinobacteria

Built upon 5 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bifidobacterium dentium Bd1
Position: -41 Score: 6.90508 Sequence: GTGCGGTAACGTTGCCGCAC Locus tag: BDP_0172 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: BDP_0173 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: BDP_0174 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: BDP_0175 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
rbsA-rbsC-rbsB-rbsD	-41	6.9	GTGCGGTAACGTTGCCGCAC	BDP_0172
Gardnerella vaginalis 409-05
Position: -281 Score: 7.12754 Sequence: TTGCGGTAACGTTACCGCAT Position: -237 Score: 5.13559 Sequence: TTGTGGGAACGTTATCTCAA Locus tag: HMPREF0424_1339 Name: rbsR1 Funciton: Transcriptional repressor of ribose utilization, LacI family Locus tag: HMPREF0424_1338 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: HMPREF0424_1337 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: HMPREF0424_1336 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: HMPREF0424_1335 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: HMPREF0424_1334 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
rbsR1-rbsA-rbsC-rbsB-rbsD-rbsK	-281	7.1	TTGCGGTAACGTTACCGCAT	HMPREF0424_1339
	-237	5.1	TTGTGGGAACGTTATCTCAA