Orthologous regulated operons containing rbsC gene
| Regulog: | RbsR1 - Bifidobacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Ribose utilization |
| Effector: | Ribose |
| Phylum: | Actinobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Bifidobacterium dentium Bd1 | ||||
|
Position: -41
Score: 6.90508 Sequence: GTGCGGTAACGTTGCCGCAC
Locus tag: BDP_0172
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: BDP_0173
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: BDP_0174
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: BDP_0175
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) |
||||
| rbsA-rbsC-rbsB-rbsD | -41 | 6.9 | GTGCGGTAACGTTGCCGCAC | BDP_0172 |
| Gardnerella vaginalis 409-05 | ||||
|
Position: -281
Score: 7.12754 Sequence: TTGCGGTAACGTTACCGCAT
Position: -237
Score: 5.13559 Sequence: TTGTGGGAACGTTATCTCAA
Locus tag: HMPREF0424_1339
Name: rbsR1 Funciton: Transcriptional repressor of ribose utilization, LacI family
Locus tag: HMPREF0424_1338
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: HMPREF0424_1337
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: HMPREF0424_1336
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: HMPREF0424_1335
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: HMPREF0424_1334
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) |
||||
| rbsR1-rbsA-rbsC-rbsB-rbsD-rbsK | -281 | 7.1 | TTGCGGTAACGTTACCGCAT | HMPREF0424_1339 |
| -237 | 5.1 | TTGTGGGAACGTTATCTCAA | ||