Orthologous regulated operons containing kdgD gene
| Regulog: | GarR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Galactarate utilization |
| Effector: | Galactarate |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Bacillus clausii KSM-K16 | ||||
|
Position: -42
Score: 6.27438 Sequence: TGTGATATATCAGATTTCATA
Locus tag: ABC3016
Name: garR Funciton: Predicted transcriptional regulator for galactarate utilization, GntR family
Locus tag: ABC3015
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: ABC3014
Name: kgsD Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # in D-glucarate/D-galactarate catabolism
Locus tag: ABC3013
Name: garD2 Funciton: D-galactarate dehydratase (EC 4.2.1.42), alternative enzyme
Locus tag: ABC3012
Name: tctC_Gar Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for galactarate
Locus tag: ABC3011
Name: tctB_Gar Funciton: Tripartite tricarboxylate transporter family small permease component, putative transporter for galactarate
Locus tag: ABC3010
Name: tctA_Gar Funciton: Tripartite tricarboxylate transporter family large permease component, putative transporter for galactarate |
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| garR-kdgD-kgsD-garD2-tctC_Gar-tctB_Gar-tctA_Gar | -42 | 6.3 | TGTGATATATCAGATTTCATA | ABC3016 |
| Oceanobacillus iheyensis HTE831 | ||||
|
Position: -41
Score: 6.65147 Sequence: GTTGATATATCAGATATCAAC
Locus tag: OB2846
Name: null Funciton: (R)-2-hydroxyacid dehydrogenase, similar to L-sulfolactate dehydrogenase (EC 1.1.1.272)
Locus tag: OB2845
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: OB2844
Name: null Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Locus tag: OB2843
Name: garD2 Funciton: D-galactarate dehydratase (EC 4.2.1.42), alternative enzyme
Locus tag: OB2842
Name: null Funciton: Predicted 5-dehydro-4-deoxyglucarate regulator YcbG
Locus tag: OB2841
Name: null Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: OB2840
Name: kgsD Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # in D-glucarate/D-galactarate catabolism |
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| OB2846-kdgD-OB2844-garD2-OB2842-OB2841-kgsD | -41 | 6.7 | GTTGATATATCAGATATCAAC | OB2846 |