Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xylB gene

Properties
Regulog: XylR - Bacillales
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose
Phylum: Firmicutes
Built upon 28 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus amyloliquefaciens FZB42
Position: -101
Score: 6.13996
Sequence: AGTTAGTTTGTTTGGGCAACAAACT
Locus tag: RBAM_017350
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: RBAM_017360
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -101 6.1 AGTTAGTTTGTTTGGGCAACAAACT RBAM_017350
Bacillus clausii KSM-K16
Position: -45
Score: 6.29605
Sequence: ACTTAGTTTAAATAATAAACAAACC
Locus tag: ABC0572
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: ABC0573
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: ABC0574
Name: galM
Funciton: Aldose 1-epimerase (EC 5.1.3.3)
xylA-xylB-galM -45 6.3 ACTTAGTTTAAATAATAAACAAACC ABC0572
Bacillus halodurans C-125
Position: -102
Score: 6.67694
Sequence: AGTTTGTCTATTGAATAAACTAAGT
Locus tag: BH2757
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BH2756
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BH2755
Name: galM
Funciton: Aldose 1-epimerase (EC 5.1.3.3)
xylA-xylB-galM -102 6.7 AGTTTGTCTATTGAATAAACTAAGT BH2757
Bacillus licheniformis DSM 13
Position: -69
Score: 6.41828
Sequence: AGTTAGTTTAATGGTTAAACAAACA
Locus tag: BLi04048
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BLi04047
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -69 6.4 AGTTAGTTTAATGGTTAAACAAACA BLi04048
Bacillus pumilus SAFR-032
Position: -47
Score: 5.90071
Sequence: AGTTTGTTGAATCAACTTACAAAGT
Locus tag: BPUM_1829
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BPUM_1828
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -47 5.9 AGTTTGTTGAATCAACTTACAAAGT BPUM_1829
Bacillus subtilis subsp. subtilis str. 168
Position: -100
Score: 6.59666
Sequence: AGTTAGTTTGTTTAAACAACAAACT
Locus tag: BSU17600
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BSU17610
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -100 6.6 AGTTAGTTTGTTTAAACAACAAACT BSU17600
Geobacillus kaustophilus HTA426
Position: -87
Score: 6.29866
Sequence: ACTTTGTTTATATGATAGACAAACA
Locus tag: GK1875
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: GK1874
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -87 6.3 ACTTTGTTTATATGATAGACAAACA GK1875
Oceanobacillus iheyensis HTE831
Position: -44
Score: 6.70639
Sequence: ACTTTGTTTGTTAGATAAACAAACA
Locus tag: OB3119
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: OB3118
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -44 6.7 ACTTTGTTTGTTAGATAAACAAACA OB3119
Paenibacillus sp. JDR-2
Position: -123
Score: 6.65337
Sequence: AGTTTGTTTAATAGACAAACTAAGT
Locus tag: Pjdr2_5159
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: Pjdr2_5158
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -123 6.7 AGTTTGTTTAATAGACAAACTAAGT Pjdr2_5159
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