Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdD gene

Properties
Regulog: NrdR - Clostridia-1
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Firmicutes
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -32
Score: 5.00288
Sequence: GTACAAGATATAGTGT
Position: 0
Score: 4.50953
Sequence: ATGCTAAATGTAGTAA
Locus tag: CAC0480
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: CAC0481
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -32 5 GTACAAGATATAGTGT CAC0480
0 4.5 ATGCTAAATGTAGTAA
Clostridium beijerincki NCIMB 8052
Position: -32
Score: 5.4671
Sequence: ATACTATATATTGTGC
Position: 0
Score: 4.83695
Sequence: ATGCTATATGTTGTGA
Locus tag: Cbei_0068
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD -32 5.5 ATACTATATATTGTGC Cbei_0068
0 4.8 ATGCTATATGTTGTGA
Clostridium botulinum A str. ATCC 3502
Position: -32
Score: 5.37497
Sequence: ACACAATATGTTGTAG
Position: 0
Score: 4.83695
Sequence: ATGCTATATGTTGTGA
Locus tag: CBO0094
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: CBO0095
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -32 5.4 ACACAATATGTTGTAG CBO0094
0 4.8 ATGCTATATGTTGTGA
Clostridium butyricum 5521
Position: -32
Score: 5.45936
Sequence: ATACAATATATTGTGC
Position: 0
Score: 4.83695
Sequence: ATGCTATATGTTGTGA
Locus tag: CBY_2237
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: CBY_2234
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -32 5.5 ATACAATATATTGTGC CBY_2237
0 4.8 ATGCTATATGTTGTGA
Clostridium kluyveri DSM 555
Position: -32
Score: 5.63997
Sequence: ACACAATATATAGTAG
Position: 0
Score: 4.57969
Sequence: ATGCTACATGTTGTGA
Locus tag: CKL_3757
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: CKL_3756
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -32 5.6 ACACAATATATAGTAG CKL_3757
0 4.6 ATGCTACATGTTGTGA
Clostridium novyi NT
Position: -31
Score: 4.98175
Sequence: GTACAATATGTTGTGG
Locus tag: NT01CX_1076
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: NT01CX_1077
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -31 5 GTACAATATGTTGTGG NT01CX_1076
Clostridium perfringens ATCC 13124
Position: -32
Score: 4.78253
Sequence: GTACAAGATATAGTGG
Position: 0
Score: 4.57969
Sequence: ATGCTACATGTTGTGA
Locus tag: CPF_2830
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD -32 4.8 GTACAAGATATAGTGG CPF_2830
0 4.6 ATGCTACATGTTGTGA
Clostridium tetani E88
Position: -32
Score: 5.66528
Sequence: ATACAATATATTGTAG
Position: 0
Score: 4.87
Sequence: ATGCTATATGTTGTAA
Locus tag: CTC00257
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: CTC00258
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -32 5.7 ATACAATATATTGTAG CTC00257
0 4.9 ATGCTATATGTTGTAA
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