Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing DVU2959 gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfomicrobium baculatum DSM 4028
Position: -101
Score: 5.15765
Sequence: GCTGGCATGGTCTTTGCCT
Locus tag: Dbac_2264
Name: null
Funciton: protein of unknown function DUF81
Locus tag: Dbac_2265
Name: null
Funciton: hypothetical membrane protein
Locus tag: Dbac_2266
Name: null
Funciton: putative sigma54 specific transcriptional regulator
Locus tag: Dbac_2267
Name: null
Funciton: hypothetical protein
Locus tag: Dbac_2268
Name: null
Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: Dbac_2269
Name: null
Funciton: response regulator receiver protein
Locus tag: Dbac_2270
Name: null
Funciton: hypothetical protein
Locus tag: Dbac_2271
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Locus tag: Dbac_2272
Name: null
Funciton: response regulator receiver sensor signal transduction histidine kinase
Locus tag: Dbac_2273
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Dbac_2264-Dbac_2265-Dbac_2266-Dbac_2267-Dbac_2268-Dbac_2269-Dbac_2270-Dbac_2271-Dbac_2272-Dbac_2273 -101 5.2 GCTGGCATGGTCTTTGCCT Dbac_2264
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Position: 47
Score: 4.03633
Sequence: TATGGCAAAGCTCCTGTTG
Locus tag: Ddes_0811
Name: null
Funciton: protein of unknown function DUF81
Locus tag: Ddes_0812
Name: null
Funciton: hypothetical membrane protein
Locus tag: Ddes_0813
Name: null
Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: Ddes_0814
Name: null
Funciton: response regulator receiver protein
Locus tag: Ddes_0815
Name: null
Funciton: hypothetical protein
Locus tag: Ddes_0816
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Locus tag: Ddes_0817
Name: null
Funciton: response regulator receiver sensor signal transduction histidine kinase
Ddes_0811-Ddes_0812-Ddes_0813-Ddes_0814-Ddes_0815-Ddes_0816-Ddes_0817 47 4 TATGGCAAAGCTCCTGTTG Ddes_0811
Desulfovibrio magneticus RS-1
Position: -132
Score: 3.93495
Sequence: AAAGGCACAATCCTTGATA
Locus tag: DMR_40120
Name: null
Funciton: protein of unknown function DUF81
Locus tag: DMR_40110
Name: null
Funciton: hypothetical membrane protein
Locus tag: DMR_40100
Name: null
Funciton: putative sigma54 specific transcriptional regulator
Locus tag: DMR_40090
Name: null
Funciton: hypothetical protein
Locus tag: DMR_40080
Name: null
Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: DMR_40070
Name: null
Funciton: response regulator receiver protein
Locus tag: DMR_40060
Name: null
Funciton: hypothetical protein
Locus tag: DMR_40050
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Locus tag: DMR_40040
Name: null
Funciton: response regulator receiver sensor signal transduction histidine kinase
DMR_40120-DMR_40110-DMR_40100-DMR_40090-DMR_40080-DMR_40070-DMR_40060-DMR_40050-DMR_40040 -132 3.9 AAAGGCACAATCCTTGATA DMR_40120
Desulfovibrio vulgaris Hildenborough
Position: -65
Score: 4.70204
Sequence: GCTGGCACGGAACTTGTTA
Locus tag: DVU2957
Name: null
Funciton: hypothetical protein
Locus tag: DVU2958
Name: null
Funciton: protein of unknown function DUF81
Locus tag: DVU2959
Name: null
Funciton: hypothetical membrane protein
Locus tag: DVU2960
Name: ntrC
Funciton: putative sigma54 specific transcriptional regulator
Locus tag: DVU2961
Name: null
Funciton: hypothetical protein
Locus tag: DVU2962
Name: null
Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: DVU2963
Name: null
Funciton: response regulator receiver protein
Locus tag: DVU2964
Name: null
Funciton: hypothetical protein
Locus tag: DVU2965
Name: null
Funciton: hypothetical protein
Locus tag: DVU2966
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Locus tag: DVU2967
Name: null
Funciton: response regulator receiver sensor signal transduction histidine kinase
DVU2957-DVU2958-DVU2959-ntrC-DVU2961-DVU2962-DVU2963-DVU2964-DVU2965-DVU2966-DVU2967 -65 4.7 GCTGGCACGGAACTTGTTA DVU2957
Desulfovibrio vulgaris str. Miyazaki F
Position: -205
Score: 4.5015
Sequence: GATGGCACGAAACTTGTTA
Locus tag: DvMF_1764
Name: null
Funciton: protein of unknown function DUF81
Locus tag: DvMF_1765
Name: null
Funciton: hypothetical membrane protein
Locus tag: DvMF_1766
Name: null
Funciton: putative sigma54 specific transcriptional regulator
Locus tag: DvMF_1767
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_1768
Name: null
Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: DvMF_1769
Name: null
Funciton: response regulator receiver protein
Locus tag: DvMF_1770
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_1771
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_1772
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Locus tag: DvMF_1773
Name: null
Funciton: response regulator receiver sensor signal transduction histidine kinase
DvMF_1764-DvMF_1765-DvMF_1766-DvMF_1767-DvMF_1768-DvMF_1769-DvMF_1770-DvMF_1771-DvMF_1772-DvMF_1773 -205 4.5 GATGGCACGAAACTTGTTA DvMF_1764