Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpmJ2 gene

Properties
Regulog: Zur - Micrococcineae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Actinobacteria
Built upon 40 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Arthrobacter aurescens TC1
Position: -118
Score: 6.00054
Sequence: TATTGAGAATGCTTCTCAATA
Locus tag: AAur_2880
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: AAur_2879
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
yciC-rpmJ2 -118 6 TATTGAGAATGCTTCTCAATA AAur_2880
Arthrobacter sp. FB24
Position: -2
Score: 5.6669
Sequence: AAATGAGAATGATTCTCATAT
Locus tag: Arth_3252
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: Arth_3254
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
yciC-rpmJ2 -2 5.7 AAATGAGAATGATTCTCATAT Arth_3252
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Position: -34
Score: 5.60127
Sequence: TATTGAGAACCGTTCTCGTGA
Locus tag: CMM_0025
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmJ2 -34 5.6 TATTGAGAACCGTTCTCGTGA CMM_0025
Leifsonia xyli subsp. xyli str. CTCB07
Position: -34
Score: 5.56
Sequence: TAATGATAATCTTTCTCAGTA
Locus tag: Lxx20595
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmJ2 -34 5.6 TAATGATAATCTTTCTCAGTA Lxx20595
Renibacterium salmoninarum ATCC 33209
Position: -33
Score: 5.01537
Sequence: AAATGAGAATCATTCGCATGT
Locus tag: RSal33209_1680
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: RSal33209_1679
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
yciC-rpmJ2 -33 5 AAATGAGAATCATTCGCATGT RSal33209_1680
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