Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing apcF gene

Properties
Regulog: NtcA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: 2-oxoglutarate
Phylum: Cyanobacteria
Built upon 228 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -177
Score: 3.75655
Sequence: TGTGATAAGAAATACA
Locus tag: cce_1944
Name: apcF
Funciton: phycobilisome core component
apcF -177 3.8 TGTGATAAGAAATACA cce_1944
Cyanothece sp. PCC 7425
Position: -281
Score: 4.91139
Sequence: TGTATCATGAGTTACA
Locus tag: Cyan7425_1838
Name: apcF
Funciton: phycobilisome core component
apcF -281 4.9 TGTATCATGAGTTACA Cyan7425_1838
Cyanothece sp. PCC 8801
Position: -251
Score: 4.00512
Sequence: TGTATACCATGATACG
Locus tag: PCC8801_0807
Name: apcF
Funciton: phycobilisome core component
apcF -251 4 TGTATACCATGATACG PCC8801_0807
Nostoc sp. PCC 7120
Position: -233
Score: 4.77666
Sequence: TGTAGTCTTTGTTACA
Locus tag: all2327
Name: apcF
Funciton: phycobilisome core component
apcF -233 4.8 TGTAGTCTTTGTTACA all2327
Synechococcus elongatus PCC 7942
Position: -214
Score: 4.83852
Sequence: TGTAACAGCTGATACA
Locus tag: Synpcc7942_2158
Name: apcF
Funciton: phycobilisome core component
apcF -214 4.8 TGTAACAGCTGATACA Synpcc7942_2158
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