Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF00258 gene

Properties
Regulog: Fur - Clostridia-3
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Firmicutes
Built upon 49 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridiales bacterium 1_7_47_FAA
Position: -118
Score: 4.57208
Sequence: TTTGAGAAATATTCCCATC
Locus tag: Cbac1_010100027059
Name: PF12672
Funciton: Protein of unknown function (DUF3793)
Locus tag: Cbac1_010100027064
Name: PF00258
Funciton: Flavodoxins
PF12672-PF00258 -118 4.6 TTTGAGAAATATTCCCATC Cbac1_010100027059
Clostridium bolteae ATCC BAA-613
Position: -289
Score: 5.32527
Sequence: AATGAGAAAAAAACTCAAT
Locus tag: CLOBOL_03816
Name: PF12672
Funciton: Protein of unknown function (DUF3793)
Locus tag: CLOBOL_03815
Name: PF00258
Funciton: Flavodoxins
PF12672-PF00258 -289 5.3 AATGAGAAAAAAACTCAAT CLOBOL_03816
Clostridium nexile DSM 1787
Position: -275
Score: 4.70961
Sequence: TTGGAGAAAAATTTTCATT
Locus tag: CLONEX_01942
Name: PF12672
Funciton: Protein of unknown function (DUF3793)
Locus tag: CLONEX_01941
Name: PF00258
Funciton: Flavodoxins
Locus tag: CLONEX_01940
Name: PF10087
Funciton: Uncharacterized protein conserved in bacteria (DUF2325)
PF12672-PF00258-PF10087 -275 4.7 TTGGAGAAAAATTTTCATT CLONEX_01942
Dorea formicigenerans ATCC 27755
Position: -37
Score: 5.45944
Sequence: AATGATAATCAAAATCAAT
Locus tag: DORFOR_00837
Name: PF12672
Funciton: Protein of unknown function (DUF3793)
Locus tag: DORFOR_00836
Name: PF00258
Funciton: Flavodoxins
Locus tag: DORFOR_00835
Name: PF10087
Funciton: Uncharacterized protein conserved in bacteria (DUF2325)
PF12672-PF00258-PF10087 -37 5.5 AATGATAATCAAAATCAAT DORFOR_00837
Dorea longicatena DSM 13814
Position: -125
Score: 4.60655
Sequence: AATGAGGATTTATGTCATT
Locus tag: DORLON_00357
Name: PF12672
Funciton: Protein of unknown function (DUF3793)
Locus tag: DORLON_00358
Name: PF00258
Funciton: Flavodoxins
PF12672-PF00258 -125 4.6 AATGAGGATTTATGTCATT DORLON_00357
Ruminococcus gnavus ATCC 29149
Position: -95
Score: 5.6067
Sequence: AATGAGAAAACTTCTCAAT
Position: -32
Score: 5.64338
Sequence: ATTGAGAATCATAATCATT
Locus tag: RUMGNA_03290
Name: PF12672
Funciton: Protein of unknown function (DUF3793)
Locus tag: RUMGNA_03289
Name: PF00258
Funciton: Flavodoxins
PF12672-PF00258 -95 5.6 AATGAGAAAACTTCTCAAT RUMGNA_03290
-32 5.6 ATTGAGAATCATAATCATT
Ruminococcus lactaris ATCC 29176
Position: -26
Score: 5.25691
Sequence: AATGAGAAAAGTTCTCAAA
Position: -1
Score: 5.32198
Sequence: ATTGAAAATCATTCTCAAG
Position: 36
Score: 5.40052
Sequence: ATTGAAAATCATTCTCAAA
Locus tag: RUMLAC_00863
Name: PF12672
Funciton: Protein of unknown function (DUF3793)
Locus tag: RUMLAC_00864
Name: PF00258
Funciton: Flavodoxins
PF12672-PF00258 -26 5.3 AATGAGAAAAGTTCTCAAA RUMLAC_00863
-1 5.3 ATTGAAAATCATTCTCAAG
36 5.4 ATTGAAAATCATTCTCAAA
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