Orthologous regulated operons containing garD gene

Properties
Regulog:	GguR - Pseudomonadaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucuronate utilization; Glucarate utilization; Galacturonate utilization; Galactarate utilization
Effector:
Phylum:	Proteobacteria/Gamma

Built upon 25 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Pseudomonas entomophila L48
Position: -71 Score: 5.47998 Sequence: ATGTTGTACGATAACTT Locus tag: PSEEN2658 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: PSEEN2657 Name: garP Funciton: D-galactarate permease Locus tag: PSEEN2656 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: PSEEN2655 Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
kdgD-garP-garD-kgsD	-71	5.5	ATGTTGTACGATAACTT	PSEEN2658
Pseudomonas mendocina ymp
Position: -275 Score: 5.08919 Sequence: ATGTTGTCGTATGACCT Position: -76 Score: 4.71593 Sequence: TTGTTGTACGATAACGT Locus tag: Pmen_1215 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: Pmen_1216 Name: gudD Funciton: Glucarate dehydratase (EC 4.2.1.40) Locus tag: Pmen_1217 Name: garP Funciton: D-galactarate permease Locus tag: Pmen_1218 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Pmen_1219 Name: serA Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
kdgD-gudD-garP-garD-serA	-275	5.1	ATGTTGTCGTATGACCT	Pmen_1215
	-76	4.7	TTGTTGTACGATAACGT
Pseudomonas putida KT2440
Position: -71 Score: 5.28576 Sequence: AGGTTGTACGATAACTT Locus tag: PP3599 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: PP3600 Name: garP Funciton: D-galactarate permease Locus tag: PP3601 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: PP3602 Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
kdgD-garP-garD-kgsD	-71	5.3	AGGTTGTACGATAACTT	PP3599
Pseudomonas syringae pv. tomato str. DC3000
Position: -77 Score: 5.0964 Sequence: CAGTTGTACGATGACTT Locus tag: PSPTO4549 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: PSPTO4548 Name: garP Funciton: D-galactarate permease Locus tag: PSPTO4547 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
kdgD-garP-garD	-77	5.1	CAGTTGTACGATGACTT	PSPTO4549