Orthologous regulated operons containing uxuL1 gene
| Regulog: | GguR - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Acidovorax avenae subsp. citrulli AAC00-1 | ||||
|
Position: -17
Score: 5.31837 Sequence: GCGTTGTACGACAACAT
Locus tag: Aave_2590
Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: Aave_2591
Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Aave_2592
Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Aave_2593
Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Aave_2594
Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: Aave_2595
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: Aave_2596
Name: uxuL2 Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Aave_2597
Name: tctC2 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates |
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| udh-uxuL1-uxuP-uxuQ-uxuM-garD-uxuL2-tctC2 | -17 | 5.3 | GCGTTGTACGACAACAT | Aave_2590 |
| Polaromonas naphthalenivorans CJ2 | ||||
|
Position: -98
Score: 4.72113 Sequence: GAGTCATCAGACAACGT
Locus tag: Pnap_1591
Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: Pnap_1592
Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Pnap_1593
Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Pnap_1594
Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Pnap_1595
Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: Pnap_1596
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: Pnap_1597
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: Pnap_1598
Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: Pnap_1599
Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: Pnap_1600
Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: Pnap_1601
Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates |
||||
| udh-uxuL1-uxuP-uxuQ-uxuM-kdgD-garD-kgsD-garL-garR-tctC1 | -98 | 4.7 | GAGTCATCAGACAACGT | Pnap_1591 |
| Polaromonas sp. JS666 | ||||
|
Position: -97
Score: 4.61422 Sequence: CAGTCATCAGACAACCT
Locus tag: Bpro_3109
Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: Bpro_3108
Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Bpro_3107
Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Bpro_3106
Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Bpro_3105
Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: Bpro_3104
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: Bpro_3103
Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: Bpro_3102
Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: Bpro_3101
Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
Locus tag: Bpro_3100
Name: aldE Funciton: Aldose 1-epimerase (EC 5.1.3.3) |
||||
| udh-uxuL1-uxuP-uxuQ-uxuM-garD-garL-garR-tctC1-aldE | -97 | 4.6 | CAGTCATCAGACAACCT | Bpro_3109 |
| Variovorax paradoxus S110 | ||||
|
Position: -39
Score: 5.10689 Sequence: TAGTTGTACGACAACAG
Locus tag: Vapar_1726
Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: Vapar_1725
Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Vapar_1724
Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Vapar_1723
Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Vapar_1722
Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: Vapar_1721
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: Vapar_1720
Name: null Funciton: short-chain dehydrogenase/reductase SDR
Locus tag: Vapar_1719
Name: null Funciton: hypothetical protein
Locus tag: Vapar_1718
Name: uxuF Funciton: Predicted uronate lactonase, PF10282 family
Locus tag: Vapar_1717
Name: tctC2 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates |
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| udh-uxuL1-uxuP-uxuQ-uxuM-garD-Vapar_1720-Vapar_1719-uxuF-tctC2 | -39 | 5.1 | TAGTTGTACGACAACAG | Vapar_1726 |