Orthologous regulated operons containing udh gene

Properties
Regulog:	GguR - Comamonadaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization
Effector:
Phylum:	Proteobacteria/Beta

Built upon 32 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -17 Score: 5.31837 Sequence: GCGTTGTACGACAACAT Locus tag: Aave_2590 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Aave_2591 Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: Aave_2592 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Aave_2593 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Aave_2594 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Aave_2595 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Aave_2596 Name: uxuL2 Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: Aave_2597 Name: tctC2 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
udh-uxuL1-uxuP-uxuQ-uxuM-garD-uxuL2-tctC2	-17	5.3	GCGTTGTACGACAACAT	Aave_2590
Leptothrix cholodnii SP-6
Position: -95 Score: 5.4475 Sequence: ACGTTGTACGACAACTG Locus tag: Lcho_1115 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Lcho_1114 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Lcho_1113 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Lcho_1112 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Lcho_1111 Name: uxuL2 Funciton: Predicted glucuronolactone/galactarolactone lactonase
udh-uxuP-uxuQ-uxuM-uxuL2	-95	5.4	ACGTTGTACGACAACTG	Lcho_1115
Polaromonas naphthalenivorans CJ2
Position: -98 Score: 4.72113 Sequence: GAGTCATCAGACAACGT Locus tag: Pnap_1591 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Pnap_1592 Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: Pnap_1593 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Pnap_1594 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Pnap_1595 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Pnap_1596 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: Pnap_1597 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Pnap_1598 Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) Locus tag: Pnap_1599 Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Locus tag: Pnap_1600 Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) Locus tag: Pnap_1601 Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
udh-uxuL1-uxuP-uxuQ-uxuM-kdgD-garD-kgsD-garL-garR-tctC1	-98	4.7	GAGTCATCAGACAACGT	Pnap_1591
Polaromonas sp. JS666
Position: -97 Score: 4.61422 Sequence: CAGTCATCAGACAACCT Locus tag: Bpro_3109 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Bpro_3108 Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: Bpro_3107 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Bpro_3106 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Bpro_3105 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Bpro_3104 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Bpro_3103 Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Locus tag: Bpro_3102 Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) Locus tag: Bpro_3101 Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates Locus tag: Bpro_3100 Name: aldE Funciton: Aldose 1-epimerase (EC 5.1.3.3)
udh-uxuL1-uxuP-uxuQ-uxuM-garD-garL-garR-tctC1-aldE	-97	4.6	CAGTCATCAGACAACCT	Bpro_3109
Variovorax paradoxus S110
Position: -39 Score: 5.10689 Sequence: TAGTTGTACGACAACAG Locus tag: Vapar_1726 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Vapar_1725 Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: Vapar_1724 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Vapar_1723 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Vapar_1722 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Vapar_1721 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Vapar_1720 Name: null Funciton: short-chain dehydrogenase/reductase SDR Locus tag: Vapar_1719 Name: null Funciton: hypothetical protein Locus tag: Vapar_1718 Name: uxuF Funciton: Predicted uronate lactonase, PF10282 family Locus tag: Vapar_1717 Name: tctC2 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
udh-uxuL1-uxuP-uxuQ-uxuM-garD-Vapar_1720-Vapar_1719-uxuF-tctC2	-39	5.1	TAGTTGTACGACAACAG	Vapar_1726