Orthologous regulated operons containing garR gene

Properties
Regulog:	GguR - Comamonadaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization
Effector:
Phylum:	Proteobacteria/Beta

Built upon 32 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Leptothrix cholodnii SP-6
Position: -65 Score: 5.13193 Sequence: ATGTTGTACGATGACAT Position: -58 Score: 4.38503 Sequence: ACGATGACATACAACAT Locus tag: Lcho_1117 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: Lcho_1118 Name: gudD Funciton: Glucarate dehydratase (EC 4.2.1.40) Locus tag: Lcho_1119 Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) Locus tag: Lcho_1120 Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates Locus tag: Lcho_1121 Name: serA Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Locus tag: Lcho_1122 Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Locus tag: Lcho_1123 Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
kdgD-gudD-kgsD-tctC1-serA-garL-garR	-65	5.1	ATGTTGTACGATGACAT	Lcho_1117
	-58	4.4	ACGATGACATACAACAT
Methylibium petroleiphilum PM1
Position: -84 Score: 5.08072 Sequence: ATGTTGTACGATGACGT Position: -77 Score: 4.12899 Sequence: ACGATGACGTACAACTA Locus tag: Mpe_A0972 Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates Locus tag: Mpe_A0973 Name: serA Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Locus tag: Mpe_A0974 Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Locus tag: Mpe_A0975 Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) Locus tag: Mpe_A0976 Name: garK Funciton: D-glycerate 2-kinase (EC 2.7.1.-)
tctC1-serA-garL-garR-garK	-84	5.1	ATGTTGTACGATGACGT	Mpe_A0972
	-77	4.1	ACGATGACGTACAACTA
Polaromonas naphthalenivorans CJ2
Position: -98 Score: 4.72113 Sequence: GAGTCATCAGACAACGT Locus tag: Pnap_1591 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Pnap_1592 Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: Pnap_1593 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Pnap_1594 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Pnap_1595 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Pnap_1596 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: Pnap_1597 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Pnap_1598 Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) Locus tag: Pnap_1599 Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Locus tag: Pnap_1600 Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) Locus tag: Pnap_1601 Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
udh-uxuL1-uxuP-uxuQ-uxuM-kdgD-garD-kgsD-garL-garR-tctC1	-98	4.7	GAGTCATCAGACAACGT	Pnap_1591
Polaromonas sp. JS666
Position: -97 Score: 4.61422 Sequence: CAGTCATCAGACAACCT Locus tag: Bpro_3109 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Bpro_3108 Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: Bpro_3107 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Bpro_3106 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Bpro_3105 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Bpro_3104 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Bpro_3103 Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Locus tag: Bpro_3102 Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) Locus tag: Bpro_3101 Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates Locus tag: Bpro_3100 Name: aldE Funciton: Aldose 1-epimerase (EC 5.1.3.3)
udh-uxuL1-uxuP-uxuQ-uxuM-garD-garL-garR-tctC1-aldE	-97	4.6	CAGTCATCAGACAACCT	Bpro_3109