Orthologous regulated operons containing gnd gene

Properties
Regulog:	UxaR - Thermotogales
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Galacturonate utilization; Pectin utilization
Effector:
Phylum:	Thermotogae

Built upon 18 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Thermotoga maritima MSB8
Position: -25 Score: 6.43026 Sequence: TGAAACATCAAACATCT Locus tag: TM0436 Name: aldH Funciton: alcohol dehydrogenase, zinc-containing Locus tag: TM0437 Name: pelB Funciton: Polygalacturonase (EC 3.2.1.15) Locus tag: TM0438 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Locus tag: TM0439 Name: uxaR Funciton: Regulator of pectin and galacturonate utilization, GntR family Locus tag: TM0440 Name: uxaE Funciton: D-tagaturonate epimerase Locus tag: TM0441 Name: uxuB2 Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent Locus tag: TM0442 Name: gntE Funciton: novel D-mannonate-D-gluconate epimerase Locus tag: TM0443 Name: gntK Funciton: Gluconokinase (EC 2.7.1.12)
aldH-pelB-gnd-uxaR-uxaE-uxuB2-gntE-gntK	-25	6.4	TGAAACATCAAACATCT	TM0436
Thermotoga naphthophila RKU-10
Position: -88 Score: 6.35322 Sequence: TAAAACATCACATATCT Locus tag: Tnap_0217 Name: uxaP Funciton: Predicted galacturonate TRAP transporter, substrate binding subunit Locus tag: Tnap_0218 Name: uxaQ Funciton: Predicted galacturonate TRAP transporter, small permease subunit Locus tag: Tnap_0219 Name: uxaM Funciton: Predicted galacturonate TRAP transporter, large permease subunit Locus tag: Tnap_0220 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Locus tag: Tnap_0221 Name: uxaR Funciton: Regulator of pectin and galacturonate utilization, GntR family Locus tag: Tnap_0222 Name: uxaE Funciton: D-tagaturonate epimerase Locus tag: Tnap_0223 Name: uxuB2 Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent Locus tag: Tnap_0224 Name: gntE Funciton: novel D-mannonate-D-gluconate epimerase Locus tag: Tnap_0225 Name: gntK Funciton: Gluconokinase (EC 2.7.1.12)
uxaP-uxaQ-uxaM-gnd-uxaR-uxaE-uxuB2-gntE-gntK	-88	6.4	TAAAACATCACATATCT	Tnap_0217
Thermotoga neapolitana DSM 4359
Position: -33 Score: 6.35322 Sequence: TAAAACATCACATATCT Locus tag: CTN_0237 Name: uxaP Funciton: Predicted galacturonate TRAP transporter, substrate binding subunit Locus tag: CTN_0236 Name: uxaQ Funciton: Predicted galacturonate TRAP transporter, small permease subunit Locus tag: CTN_0235 Name: uxaM Funciton: Predicted galacturonate TRAP transporter, large permease subunit Locus tag: CTN_0234 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Locus tag: CTN_0233 Name: uxaR Funciton: Regulator of pectin and galacturonate utilization, GntR family Locus tag: CTN_0232 Name: uxaE Funciton: D-tagaturonate epimerase Locus tag: CTN_0231 Name: uxuB2 Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent Locus tag: CTN_0230 Name: gntE Funciton: novel D-mannonate-D-gluconate epimerase Locus tag: CTN_0229 Name: gntK Funciton: Gluconokinase (EC 2.7.1.12)
uxaP-uxaQ-uxaM-gnd-uxaR-uxaE-uxuB2-gntE-gntK	-33	6.4	TAAAACATCACATATCT	CTN_0237
Thermotoga petrophila RKU-1
Position: -28 Score: 6.43026 Sequence: TGAAACATCAAACATCT Locus tag: Tpet_0484 Name: aldH Funciton: alcohol dehydrogenase, zinc-containing Locus tag: Tpet_0483 Name: pelB Funciton: Polygalacturonase (EC 3.2.1.15) Locus tag: Tpet_0482 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Locus tag: Tpet_0481 Name: uxaR Funciton: Regulator of pectin and galacturonate utilization, GntR family Locus tag: Tpet_0480 Name: uxaE Funciton: D-tagaturonate epimerase Locus tag: Tpet_0479 Name: uxuB2 Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent Locus tag: Tpet_0478 Name: gntE Funciton: novel D-mannonate-D-gluconate epimerase Locus tag: Tpet_0477 Name: gntK Funciton: Gluconokinase (EC 2.7.1.12)
aldH-pelB-gnd-uxaR-uxaE-uxuB2-gntE-gntK	-28	6.4	TGAAACATCAAACATCT	Tpet_0484
Thermotoga sp. RQ2
Position: -29 Score: 6.43026 Sequence: TGAAACATCAAACATCT Locus tag: TRQ2_0499 Name: aldH Funciton: alcohol dehydrogenase, zinc-containing Locus tag: TRQ2_0498 Name: pelB Funciton: Polygalacturonase (EC 3.2.1.15) Locus tag: TRQ2_0497 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Locus tag: TRQ2_0496 Name: uxaR Funciton: Regulator of pectin and galacturonate utilization, GntR family Locus tag: TRQ2_0495 Name: uxaE Funciton: D-tagaturonate epimerase Locus tag: TRQ2_0494 Name: uxuB2 Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent Locus tag: TRQ2_0493 Name: gntE Funciton: novel D-mannonate-D-gluconate epimerase Locus tag: TRQ2_0492 Name: gntK Funciton: Gluconokinase (EC 2.7.1.12)
aldH-pelB-gnd-uxaR-uxaE-uxuB2-gntE-gntK	-29	6.4	TGAAACATCAAACATCT	TRQ2_0499