Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG2938 gene

Properties
Regulog: SdhR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Phylum: Proteobacteria/Beta
Built upon 36 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -20
Score: 7.03683
Sequence: TCTTATGTCTTATATAAGATATGATG
Locus tag: Aave_2205
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Aave_2204
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Aave_2203
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Aave_2202
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Aave_2201
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Aave_2200
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Aave_2199
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -20 7 TCTTATGTCTTATATAAGATATGATG Aave_2205
Acidovorax sp. JS42
Position: -4
Score: 7.23905
Sequence: TCTTATGTCTTATATAAGATATGATC
Locus tag: Ajs_2792
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Ajs_2793
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Ajs_2794
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Ajs_2795
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Ajs_2796
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Ajs_2797
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Ajs_2798
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -4 7.2 TCTTATGTCTTATATAAGATATGATC Ajs_2792
Comamonas testosteroni KF-1
Position: -4
Score: 7.23905
Sequence: TCTTATGTCTTATATAAGATATGATC
Locus tag: CtesDRAFT_0621
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: CtesDRAFT_0620
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: CtesDRAFT_0619
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: CtesDRAFT_0618
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: CtesDRAFT_0617
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: CtesDRAFT_0616
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: CtesDRAFT_0615
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -4 7.2 TCTTATGTCTTATATAAGATATGATC CtesDRAFT_0621
Delftia acidovorans SPH-1
Position: -87
Score: 7.23905
Sequence: TCTTATGTCTTATATAAGATATGATC
Locus tag: Daci_2428
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Daci_2427
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Daci_2426
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Daci_2425
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Daci_2424
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Daci_2423
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Daci_2422
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -87 7.2 TCTTATGTCTTATATAAGATATGATC Daci_2428
Leptothrix cholodnii SP-6
Position: -73
Score: 7.52066
Sequence: TCTTATGTCTTATATAAGACATCTGT
Locus tag: Lcho_2707
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Lcho_2706
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Lcho_2705
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Lcho_2704
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Lcho_2703
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Lcho_2702
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Lcho_2701
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -73 7.5 TCTTATGTCTTATATAAGACATCTGT Lcho_2707
Methylibium petroleiphilum PM1
Position: -74
Score: 7.372
Sequence: TCTTATGTCTTATATAAGACATCTTT
Locus tag: Mpe_A2171
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Mpe_A2170
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Mpe_A2169
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Mpe_A2168
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Mpe_A2167
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Mpe_A2166
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Mpe_A2165
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -74 7.4 TCTTATGTCTTATATAAGACATCTTT Mpe_A2171
Polaromonas naphthalenivorans CJ2
Position: -38
Score: 7.3504
Sequence: TCTTATGTCTTATATAAGATATGATT
Locus tag: Pnap_3031
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Pnap_3032
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Pnap_3033
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Pnap_3034
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Pnap_3035
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Pnap_3036
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Pnap_3037
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -38 7.4 TCTTATGTCTTATATAAGATATGATT Pnap_3031
Polaromonas sp. JS666
Position: -49
Score: 7.4713
Sequence: TCTTATGTCTTATATAAGATATGATA
Locus tag: Bpro_3599
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bpro_3600
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bpro_3601
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bpro_3602
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bpro_3603
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bpro_3604
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bpro_3605
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -49 7.5 TCTTATGTCTTATATAAGATATGATA Bpro_3599
Rhodoferax ferrireducens DSM 15236
Position: -23
Score: 6.72716
Sequence: TCTTATGTCTTATATAAGATAAGATG
Locus tag: Rfer_1802
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Rfer_1801
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Rfer_1800
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Rfer_1799
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Rfer_1798
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Rfer_1797
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Rfer_1796
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -23 6.7 TCTTATGTCTTATATAAGATAAGATG Rfer_1802
Variovorax paradoxus S110
Position: -4
Score: 6.80457
Sequence: TCTTATGTCTTATATAAGATATGCTC
Locus tag: Vapar_1431
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Vapar_1430
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Vapar_1429
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Vapar_1428
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Vapar_1427
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Vapar_1426
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Vapar_1425
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -4 6.8 TCTTATGTCTTATATAAGATATGCTC Vapar_1431
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