Orthologous regulated operons containing sdhD gene
| Regulog: | SdhR - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Acidovorax avenae subsp. citrulli AAC00-1 | ||||
|
Position: -20
Score: 7.03683 Sequence: TCTTATGTCTTATATAAGATATGATG
Locus tag: Aave_2205
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Aave_2204
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Aave_2203
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Aave_2202
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Aave_2201
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Aave_2200
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Aave_2199
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
||||
| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -20 | 7 | TCTTATGTCTTATATAAGATATGATG | Aave_2205 |
| Acidovorax sp. JS42 | ||||
|
Position: -4
Score: 7.23905 Sequence: TCTTATGTCTTATATAAGATATGATC
Locus tag: Ajs_2792
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Ajs_2793
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Ajs_2794
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Ajs_2795
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Ajs_2796
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Ajs_2797
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Ajs_2798
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
||||
| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -4 | 7.2 | TCTTATGTCTTATATAAGATATGATC | Ajs_2792 |
| Comamonas testosteroni KF-1 | ||||
|
Position: -4
Score: 7.23905 Sequence: TCTTATGTCTTATATAAGATATGATC
Locus tag: CtesDRAFT_0621
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: CtesDRAFT_0620
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: CtesDRAFT_0619
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: CtesDRAFT_0618
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: CtesDRAFT_0617
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: CtesDRAFT_0616
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: CtesDRAFT_0615
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
||||
| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -4 | 7.2 | TCTTATGTCTTATATAAGATATGATC | CtesDRAFT_0621 |
| Delftia acidovorans SPH-1 | ||||
|
Position: -87
Score: 7.23905 Sequence: TCTTATGTCTTATATAAGATATGATC
Locus tag: Daci_2428
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Daci_2427
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Daci_2426
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Daci_2425
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Daci_2424
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Daci_2423
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Daci_2422
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
||||
| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -87 | 7.2 | TCTTATGTCTTATATAAGATATGATC | Daci_2428 |
| Leptothrix cholodnii SP-6 | ||||
|
Position: -73
Score: 7.52066 Sequence: TCTTATGTCTTATATAAGACATCTGT
Locus tag: Lcho_2707
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Lcho_2706
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Lcho_2705
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Lcho_2704
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Lcho_2703
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Lcho_2702
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Lcho_2701
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
||||
| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -73 | 7.5 | TCTTATGTCTTATATAAGACATCTGT | Lcho_2707 |
| Methylibium petroleiphilum PM1 | ||||
|
Position: -74
Score: 7.372 Sequence: TCTTATGTCTTATATAAGACATCTTT
Locus tag: Mpe_A2171
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Mpe_A2170
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Mpe_A2169
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Mpe_A2168
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Mpe_A2167
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Mpe_A2166
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Mpe_A2165
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
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| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -74 | 7.4 | TCTTATGTCTTATATAAGACATCTTT | Mpe_A2171 |
| Polaromonas naphthalenivorans CJ2 | ||||
|
Position: -38
Score: 7.3504 Sequence: TCTTATGTCTTATATAAGATATGATT
Locus tag: Pnap_3031
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Pnap_3032
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Pnap_3033
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Pnap_3034
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Pnap_3035
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Pnap_3036
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Pnap_3037
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
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| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -38 | 7.4 | TCTTATGTCTTATATAAGATATGATT | Pnap_3031 |
| Polaromonas sp. JS666 | ||||
|
Position: -49
Score: 7.4713 Sequence: TCTTATGTCTTATATAAGATATGATA
Locus tag: Bpro_3599
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bpro_3600
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bpro_3601
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bpro_3602
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bpro_3603
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bpro_3604
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bpro_3605
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
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| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -49 | 7.5 | TCTTATGTCTTATATAAGATATGATA | Bpro_3599 |
| Rhodoferax ferrireducens DSM 15236 | ||||
|
Position: -23
Score: 6.72716 Sequence: TCTTATGTCTTATATAAGATAAGATG
Locus tag: Rfer_1802
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Rfer_1801
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Rfer_1800
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Rfer_1799
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Rfer_1798
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Rfer_1797
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Rfer_1796
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
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| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -23 | 6.7 | TCTTATGTCTTATATAAGATAAGATG | Rfer_1802 |
| Variovorax paradoxus S110 | ||||
|
Position: -4
Score: 6.80457 Sequence: TCTTATGTCTTATATAAGATATGCTC
Locus tag: Vapar_1431
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Vapar_1430
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Vapar_1429
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Vapar_1428
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Vapar_1427
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Vapar_1426
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Vapar_1425
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
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| sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA | -4 | 6.8 | TCTTATGTCTTATATAAGATATGCTC | Vapar_1431 |
| Verminephrobacter eiseniae EF01-2 | ||||
|
Position: -33
Score: 7.23905 Sequence: TCTTATGTCTTATATAAGATATGATC
Locus tag: Veis_4355
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Veis_4354
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Veis_4353
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Veis_4352
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Veis_4351
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
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| sdhR-sdhC-sdhD-sdhA-sdhB | -33 | 7.2 | TCTTATGTCTTATATAAGATATGATC | Veis_4355 |