Orthologous regulated operons containing sdhD gene

Properties
Regulog:	SdhR - Various betaproteobacteria
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Phylum:	Proteobacteria/Beta

Built upon 24 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Azoarcus sp. EbN1
Position: -68 Score: 7.05826 Sequence: TCTGGTGTCTTATATAAGACATGAGA Locus tag: ebA6693 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: ebD20 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: ebB235 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: ebA6690 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: ebA6689 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: ebA6688 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: ebA6687 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) Locus tag: ebA6685 Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Locus tag: ebA6684 Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Locus tag: ebA6683 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA-odhA-sucB-lpdA	-68	7.1	TCTGGTGTCTTATATAAGACATGAGA	ebA6693
Chromobacterium violaceum ATCC 12472
Position: 77 Score: 6.99689 Sequence: TCTTATGTCTTATATAAGACTTATCT Locus tag: CV1063 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: CV1064 Name: null Funciton: hypothetical protein Locus tag: CV1065 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: CV1066 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: CV1067 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: CV1068 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: CV1069 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: CV1070 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) Locus tag: CV1071 Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Locus tag: CV1072 Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Locus tag: CV1073 Name: null Funciton: hypothetical protein Locus tag: CV1074 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) Locus tag: CV1075 Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Locus tag: CV1076 Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhR-CV1064-sdhC-sdhD-sdhA-sdhB-COG2938-gltA-odhA-sucB-CV1073-lpdA-sucC-sucD	77	7	TCTTATGTCTTATATAAGACTTATCT	CV1063
Dechloromonas aromatica RCB
Position: -66 Score: 6.98049 Sequence: TCATATGTCTTATATAAGACAACTTT Locus tag: Daro_2866 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Daro_2865 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Daro_2864 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: Daro_2863 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Daro_2862 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Daro_2861 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Daro_2860 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) Locus tag: Daro_2859 Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Locus tag: Daro_2858 Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Locus tag: Daro_2857 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA-odhA-sucB-lpdA	-66	7	TCATATGTCTTATATAAGACAACTTT	Daro_2866
Methylophilales bacterium HTCC2181
Position: -201 Score: 5.63336 Sequence: TATTAAGTCTTATATAAGAGTAAAAA Position: -68 Score: 5.54061 Sequence: TTTTAACTCTTATATAAGATATAGAA Locus tag: MB2181_04040 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: MB2181_04035 Name: MB2181_04035 Funciton: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) Locus tag: MB2181_04030 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: MB2181_04025 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: MB2181_04020 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: MB2181_04015 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: MB2181_04010 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: MB2181_04005 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6) Locus tag: MB2181_04000 Name: MB2181_04000 Funciton: acetyl-coenzyme A synthetase family protein Locus tag: MB2181_03995 Name: fumA Funciton: Fumarate hydratase class I (EC 4.2.1.2)
sdhR-MB2181_04035-sdhC-sdhD-sdhA-sdhB-COG2938-citE-MB2181_04000-fumA	-201	5.6	TATTAAGTCTTATATAAGAGTAAAAA	MB2181_04040
	-68	5.5	TTTTAACTCTTATATAAGATATAGAA
Methylotenera mobilis JLW8
Position: -115 Score: 7.36725 Sequence: TCTTATGTCTTATATAAGATATAAAA Locus tag: Mmol_0754 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Mmol_0755 Name: null Funciton: hypothetical protein Locus tag: Mmol_0756 Name: MB2181_04035 Funciton: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) Locus tag: Mmol_0757 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Mmol_0758 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: Mmol_0759 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Mmol_0760 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Mmol_0761 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Mmol_0762 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6) Locus tag: Mmol_0763 Name: MB2181_04000 Funciton: acetyl-coenzyme A synthetase family protein Locus tag: Mmol_0764 Name: fumA Funciton: Fumarate hydratase class I (EC 4.2.1.2) Locus tag: Mmol_0765 Name: null Funciton: hypothetical protein Locus tag: Mmol_0766 Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3)
sdhR-Mmol_0755-MB2181_04035-sdhC-sdhD-sdhA-sdhB-COG2938-citE-MB2181_04000-fumA-Mmol_0765-acnB	-115	7.4	TCTTATGTCTTATATAAGATATAAAA	Mmol_0754
Thauera sp. MZ1T
Position: -68 Score: 7.34179 Sequence: TCTTATATCTTATATAAGACACAAGA Locus tag: Tmz1t_2551 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Tmz1t_2550 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Tmz1t_2549 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: Tmz1t_2548 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Tmz1t_2547 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Tmz1t_2546 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Tmz1t_2545 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) Locus tag: Tmz1t_2544 Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Locus tag: Tmz1t_2543 Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Locus tag: Tmz1t_2542 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA-odhA-sucB-lpdA	-68	7.3	TCTTATATCTTATATAAGACACAAGA	Tmz1t_2551