Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing tam gene

Properties
Regulog: SdhR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Phylum: Proteobacteria/Beta
Built upon 36 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -156
Score: 7.03683
Sequence: CATCATATCTTATATAAGACATAAGA
Locus tag: Aave_2206
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Aave_2207
Name: tam
Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: Aave_2208
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Aave_2209
Name: Aave_2209
Funciton: hypothetical protein
Locus tag: Aave_2210
Name: acnB
Funciton: Aconitate hydratase (EC 4.2.1.3)
mdh-tam-citE-Aave_2209-acnB -156 7 CATCATATCTTATATAAGACATAAGA Aave_2206
Acidovorax sp. JS42
Position: -91
Score: 7.23905
Sequence: GATCATATCTTATATAAGACATAAGA
Locus tag: Ajs_2791
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Ajs_2790
Name: tam
Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: Ajs_2789
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Ajs_2788
Name: Aave_2209
Funciton: hypothetical protein
Locus tag: Ajs_2787
Name: acnB
Funciton: Aconitate hydratase (EC 4.2.1.3)
mdh-tam-citE-Aave_2209-acnB -91 7.2 GATCATATCTTATATAAGACATAAGA Ajs_2791
Comamonas testosteroni KF-1
Position: -155
Score: 7.23905
Sequence: GATCATATCTTATATAAGACATAAGA
Locus tag: CtesDRAFT_0622
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: CtesDRAFT_0623
Name: tam
Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: CtesDRAFT_0624
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: CtesDRAFT_0625
Name: Aave_2209
Funciton: hypothetical protein
Locus tag: CtesDRAFT_0626
Name: acnB
Funciton: Aconitate hydratase (EC 4.2.1.3)
mdh-tam-citE-Aave_2209-acnB -155 7.2 GATCATATCTTATATAAGACATAAGA CtesDRAFT_0622
Delftia acidovorans SPH-1
Position: -157
Score: 7.23905
Sequence: GATCATATCTTATATAAGACATAAGA
Locus tag: Daci_2429
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Daci_2430
Name: tam
Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: Daci_2431
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Daci_2432
Name: Aave_2209
Funciton: hypothetical protein
Locus tag: Daci_2433
Name: acnB
Funciton: Aconitate hydratase (EC 4.2.1.3)
mdh-tam-citE-Aave_2209-acnB -157 7.2 GATCATATCTTATATAAGACATAAGA Daci_2429
Variovorax paradoxus S110
Position: -151
Score: 6.80457
Sequence: GAGCATATCTTATATAAGACATAAGA
Locus tag: Vapar_1432
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Vapar_1433
Name: tam
Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: Vapar_1434
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Vapar_1435
Name: Aave_2209
Funciton: hypothetical protein
Locus tag: Vapar_1436
Name: acnB
Funciton: Aconitate hydratase (EC 4.2.1.3)
mdh-tam-citE-Aave_2209-acnB -151 6.8 GAGCATATCTTATATAAGACATAAGA Vapar_1432