Orthologous regulated operons containing mdh gene
| Regulog: | SdhR - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Acidovorax avenae subsp. citrulli AAC00-1 | ||||
|
Position: -156
Score: 7.03683 Sequence: CATCATATCTTATATAAGACATAAGA
Locus tag: Aave_2206
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Aave_2207
Name: tam Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: Aave_2208
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Aave_2209
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Aave_2210
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-tam-citE-Aave_2209-acnB | -156 | 7 | CATCATATCTTATATAAGACATAAGA | Aave_2206 |
| Acidovorax sp. JS42 | ||||
|
Position: -91
Score: 7.23905 Sequence: GATCATATCTTATATAAGACATAAGA
Locus tag: Ajs_2791
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Ajs_2790
Name: tam Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: Ajs_2789
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Ajs_2788
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Ajs_2787
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-tam-citE-Aave_2209-acnB | -91 | 7.2 | GATCATATCTTATATAAGACATAAGA | Ajs_2791 |
| Comamonas testosteroni KF-1 | ||||
|
Position: -155
Score: 7.23905 Sequence: GATCATATCTTATATAAGACATAAGA
Locus tag: CtesDRAFT_0622
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: CtesDRAFT_0623
Name: tam Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: CtesDRAFT_0624
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: CtesDRAFT_0625
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: CtesDRAFT_0626
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-tam-citE-Aave_2209-acnB | -155 | 7.2 | GATCATATCTTATATAAGACATAAGA | CtesDRAFT_0622 |
| Delftia acidovorans SPH-1 | ||||
|
Position: -157
Score: 7.23905 Sequence: GATCATATCTTATATAAGACATAAGA
Locus tag: Daci_2429
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Daci_2430
Name: tam Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: Daci_2431
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Daci_2432
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Daci_2433
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-tam-citE-Aave_2209-acnB | -157 | 7.2 | GATCATATCTTATATAAGACATAAGA | Daci_2429 |
| Leptothrix cholodnii SP-6 | ||||
|
Position: -175
Score: 7.52066 Sequence: ACAGATGTCTTATATAAGACATAAGA
Locus tag: Lcho_2708
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Lcho_2709
Name: null Funciton: Citrate lyase beta chain (EC 4.1.3.6) |
||||
| mdh-Lcho_2709 | -175 | 7.5 | ACAGATGTCTTATATAAGACATAAGA | Lcho_2708 |
| Methylibium petroleiphilum PM1 | ||||
|
Position: -152
Score: 7.372 Sequence: AAAGATGTCTTATATAAGACATAAGA
Locus tag: Mpe_A2172
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Mpe_A2173
Name: null Funciton: Citrate lyase beta chain (EC 4.1.3.6) |
||||
| mdh-Mpe_A2173 | -152 | 7.4 | AAAGATGTCTTATATAAGACATAAGA | Mpe_A2172 |
| Polaromonas naphthalenivorans CJ2 | ||||
|
Position: -202
Score: 7.3504 Sequence: AATCATATCTTATATAAGACATAAGA
Locus tag: Pnap_3030
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Pnap_3029
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Pnap_3028
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Pnap_3027
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-citE-Aave_2209-acnB | -202 | 7.4 | AATCATATCTTATATAAGACATAAGA | Pnap_3030 |
| Polaromonas sp. JS666 | ||||
|
Position: -239
Score: 7.4713 Sequence: TATCATATCTTATATAAGACATAAGA
Locus tag: Bpro_3598
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Bpro_3597
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Bpro_3596
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Bpro_3595
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-citE-Aave_2209-acnB | -239 | 7.5 | TATCATATCTTATATAAGACATAAGA | Bpro_3598 |
| Rhodoferax ferrireducens DSM 15236 | ||||
|
Position: -138
Score: 6.72716 Sequence: CATCTTATCTTATATAAGACATAAGA
Locus tag: Rfer_1803
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Rfer_1804
Name: null Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Rfer_1805
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Rfer_1806
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-Rfer_1804-Aave_2209-acnB | -138 | 6.7 | CATCTTATCTTATATAAGACATAAGA | Rfer_1803 |
| Variovorax paradoxus S110 | ||||
|
Position: -151
Score: 6.80457 Sequence: GAGCATATCTTATATAAGACATAAGA
Locus tag: Vapar_1432
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Vapar_1433
Name: tam Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
Locus tag: Vapar_1434
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Vapar_1435
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Vapar_1436
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-tam-citE-Aave_2209-acnB | -151 | 6.8 | GAGCATATCTTATATAAGACATAAGA | Vapar_1432 |
| Verminephrobacter eiseniae EF01-2 | ||||
|
Position: -199
Score: 7.23905 Sequence: GATCATATCTTATATAAGACATAAGA
Locus tag: Veis_4356
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Veis_4357
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Veis_4358
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
||||
| mdh-Aave_2209-acnB | -199 | 7.2 | GATCATATCTTATATAAGACATAAGA | Veis_4356 |