Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG2055 gene

Properties
Regulog: UxuR3 - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucuronate utilization
Effector:
Phylum: Proteobacteria/Beta
Built upon 9 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Polaromonas sp. JS666
Position: -297
Score: 5.07318
Sequence: AAGATGGTTTACCAATTA
Position: -141
Score: 5.89064
Sequence: TAAGTGGTATACCAATTT
Position: -118
Score: 5.09543
Sequence: TTAGTGGTTTACCACTAT
Locus tag: Bpro_3976
Name: COG0834
Funciton: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Locus tag: Bpro_3975
Name: COG0765
Funciton: ABC-type amino acid transport system, permease component
Locus tag: Bpro_3974
Name: COG0765-2
Funciton: ABC-type amino acid transport system, permease component
Locus tag: Bpro_3973
Name: COG1126
Funciton: ABC-type polar amino acid transport system, ATPase component
Locus tag: Bpro_3972
Name: COG2055
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Bpro_3971
Name: COG2706
Funciton: 3-carboxymuconate cyclase
Locus tag: Bpro_3970
Name: uxuA
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
COG0834-COG0765-COG0765-2-COG1126-COG2055-COG2706-uxuA -297 5.1 AAGATGGTTTACCAATTA Bpro_3976
-141 5.9 TAAGTGGTATACCAATTT
-118 5.1 TTAGTGGTTTACCACTAT
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