Orthologous regulated operons containing uxuA gene
| Regulog: | UxuR3 - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucuronate utilization |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Polaromonas sp. JS666 | ||||
|
Position: -297
Score: 5.07318 Sequence: AAGATGGTTTACCAATTA
Position: -141
Score: 5.89064 Sequence: TAAGTGGTATACCAATTT
Position: -118
Score: 5.09543 Sequence: TTAGTGGTTTACCACTAT
Locus tag: Bpro_3976
Name: COG0834 Funciton: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Locus tag: Bpro_3975
Name: COG0765 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Bpro_3974
Name: COG0765-2 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Bpro_3973
Name: COG1126 Funciton: ABC-type polar amino acid transport system, ATPase component
Locus tag: Bpro_3972
Name: COG2055 Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Bpro_3971
Name: COG2706 Funciton: 3-carboxymuconate cyclase
Locus tag: Bpro_3970
Name: uxuA Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
||||
| COG0834-COG0765-COG0765-2-COG1126-COG2055-COG2706-uxuA | -297 | 5.1 | AAGATGGTTTACCAATTA | Bpro_3976 |
| -141 | 5.9 | TAAGTGGTATACCAATTT | ||
| -118 | 5.1 | TTAGTGGTTTACCACTAT | ||
| Variovorax paradoxus S110 | ||||
|
Position: -69
Score: 5.0475 Sequence: CTAGTGGTAAACCACTAT
Position: -46
Score: 4.766 Sequence: TAATTGGTATGCCACGCA
Locus tag: Vapar_2876
Name: uxuR3 Funciton: Predicted transcriptional regulator for glucuronate utilization, GntR family
Locus tag: Vapar_2877
Name: Aave_2470 Funciton: Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) # Periplasmic precursor
Locus tag: Vapar_2878
Name: COG0834 Funciton: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Locus tag: Vapar_2879
Name: COG1063 Funciton: Zn-dependent dehydrogenase
Locus tag: Vapar_2880
Name: COG0765 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Vapar_2881
Name: COG0765-2 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Vapar_2882
Name: COG1126 Funciton: ABC-type polar amino acid transport system, ATPase component
Locus tag: Vapar_2883
Name: Bpro_3978 Funciton: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
Locus tag: Vapar_2884
Name: uxuA Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
||||
| uxuR3-Aave_2470-COG0834-COG1063-COG0765-COG0765-2-COG1126-Bpro_3978-uxuA | -69 | 5 | CTAGTGGTAAACCACTAT | Vapar_2876 |
| -46 | 4.8 | TAATTGGTATGCCACGCA | ||
| Verminephrobacter eiseniae EF01-2 | ||||
|
Position: -66
Score: 5.0475 Sequence: CTAGTGGTAAACCACTAT
Locus tag: Veis_3567
Name: uxuR3 Funciton: Predicted transcriptional regulator for glucuronate utilization, GntR family
Locus tag: Veis_3566
Name: COG0834 Funciton: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Locus tag: Veis_3565
Name: COG1063 Funciton: Zn-dependent dehydrogenase
Locus tag: Veis_3564
Name: COG0765 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Veis_3563
Name: COG0765-2 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Veis_3562
Name: COG1126 Funciton: ABC-type polar amino acid transport system, ATPase component
Locus tag: Veis_3561
Name: Bpro_3978 Funciton: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
Locus tag: Veis_3560
Name: uxuA Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
||||
| uxuR3-COG0834-COG1063-COG0765-COG0765-2-COG1126-Bpro_3978-uxuA | -66 | 5 | CTAGTGGTAAACCACTAT | Veis_3567 |