Orthologous regulated operons containing Rfer_3131 gene
| Regulog: | UxuR2 - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Variovorax paradoxus S110 | ||||
|
Position: -157
Score: 4.6616 Sequence: GATCTGGTCATGCCAGTTT
Position: -42
Score: 4.69657 Sequence: AAAGTGGCCTCGCCAAATT
Position: -28
Score: 5.05008 Sequence: AAATTGGTAAGGCCAAAAG
Locus tag: Vapar_5317
Name: null Funciton: amidohydrolase 2
Locus tag: Vapar_5318
Name: Rfer_3129 Funciton: ABC-type sugar transport system, ATP-binding protein (EC 3.6.3.17)
Locus tag: Vapar_5319
Name: Rfer_3130 Funciton: Possible fucose ABC transporter, permease component
Locus tag: Vapar_5320
Name: Rfer_3131 Funciton: Possible fucose ABC transporter, substrate-binding component
Locus tag: Vapar_5321
Name: Rfer_3134 Funciton: L-fuconate dehydratase (EC 4.2.1.68)
Locus tag: Vapar_5322
Name: Rfer_3136 Funciton: SDR dehydrogenase clustered with L-fuconate utilization genes
Locus tag: Vapar_5323
Name: Rfer_3138 Funciton: Possible alternative L-fucose mutarotase |
||||
| Vapar_5317-Rfer_3129-Rfer_3130-Rfer_3131-Rfer_3134-Rfer_3136-Rfer_3138 | -157 | 4.7 | GATCTGGTCATGCCAGTTT | Vapar_5317 |
| -42 | 4.7 | AAAGTGGCCTCGCCAAATT | ||
| -28 | 5.1 | AAATTGGTAAGGCCAAAAG | ||