Orthologous regulated operons containing Rfer_3129 gene

Properties
Regulog:	UxuR2 - Comamonadaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucuronate utilization; Galacturonate utilization
Effector:
Phylum:	Proteobacteria/Beta

Built upon 24 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Variovorax paradoxus S110
Position: -157 Score: 4.6616 Sequence: GATCTGGTCATGCCAGTTT Position: -42 Score: 4.69657 Sequence: AAAGTGGCCTCGCCAAATT Position: -28 Score: 5.05008 Sequence: AAATTGGTAAGGCCAAAAG Locus tag: Vapar_5317 Name: null Funciton: amidohydrolase 2 Locus tag: Vapar_5318 Name: Rfer_3129 Funciton: ABC-type sugar transport system, ATP-binding protein (EC 3.6.3.17) Locus tag: Vapar_5319 Name: Rfer_3130 Funciton: Possible fucose ABC transporter, permease component Locus tag: Vapar_5320 Name: Rfer_3131 Funciton: Possible fucose ABC transporter, substrate-binding component Locus tag: Vapar_5321 Name: Rfer_3134 Funciton: L-fuconate dehydratase (EC 4.2.1.68) Locus tag: Vapar_5322 Name: Rfer_3136 Funciton: SDR dehydrogenase clustered with L-fuconate utilization genes Locus tag: Vapar_5323 Name: Rfer_3138 Funciton: Possible alternative L-fucose mutarotase
Vapar_5317-Rfer_3129-Rfer_3130-Rfer_3131-Rfer_3134-Rfer_3136-Rfer_3138	-157	4.7	GATCTGGTCATGCCAGTTT	Vapar_5317
	-42	4.7	AAAGTGGCCTCGCCAAATT
	-28	5.1	AAATTGGTAAGGCCAAAAG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --