Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG2863 gene

Properties
Regulog: YdcR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Leptothrix cholodnii SP-6
Position: -110
Score: 7.10299
Sequence: CGCTGATCCGATCGA-(10)-ATCTGCACCTGACCG
Locus tag: Lcho_1322
Name: COG2863
Funciton: Probable cytochrome c2
Locus tag: Lcho_1321
Name: COG3258
Funciton: Putative diheme cytochrome c-553
COG2863-COG3258 -110 7.1 CGCTGATCCGATCGA-(10)-ATCTGCACCTGACCG Lcho_1322
Methylibium petroleiphilum PM1
Position: -46
Score: 7.68338
Sequence: AACTGATCTGGTTTT-(9)-ATCTGAGCCTTCAAA
Locus tag: Mpe_A0753
Name: Mpe_A0753
Funciton: putative transmembrane protein
Locus tag: Mpe_A0754
Name: COG2863
Funciton: Probable cytochrome c2
Locus tag: Mpe_A0755
Name: COG3258
Funciton: Putative diheme cytochrome c-553
Mpe_A0753-COG2863-COG3258 -46 7.7 AACTGATCTGGTTTT-(9)-ATCTGAGCCTTCAAA Mpe_A0753
Polaromonas sp. JS666
Position: -68
Score: 9.23043
Sequence: ATCTGATATGGTTTT-(9)-ATCTGATGCTTACGC
Position: -44
Score: 7.2904
Sequence: ATCTGATGCTTACGC-(9)-ATGTGAGGCATGATT
Locus tag: Bpro_3448
Name: COG2863
Funciton: Probable cytochrome c2
Locus tag: Bpro_3449
Name: COG3258
Funciton: Putative diheme cytochrome c-553
COG2863-COG3258 -68 9.2 ATCTGATATGGTTTT-(9)-ATCTGATGCTTACGC Bpro_3448
-44 7.3 ATCTGATGCTTACGC-(9)-ATGTGAGGCATGATT
Variovorax paradoxus S110
Position: -68
Score: 8.6072
Sequence: ATCTGCTCCGGTGAT-(9)-AACTGCATCTGTTTT
Locus tag: Vapar_4652
Name: Mpe_A0753
Funciton: putative transmembrane protein
Locus tag: Vapar_4653
Name: COG2863
Funciton: Probable cytochrome c2
Locus tag: Vapar_4654
Name: COG3258
Funciton: Putative diheme cytochrome c-553
Mpe_A0753-COG2863-COG3258 -68 8.6 ATCTGCTCCGGTGAT-(9)-AACTGCATCTGTTTT Vapar_4652