Orthologous regulated operons containing gbtC gene
| Regulog: | GabR2 - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Gamma-aminobutyrate utilization |
| Effector: | Gamma-aminobutyric acid |
| Phylum: | Proteobacteria/Beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Polaromonas naphthalenivorans CJ2 | ||||
|
Position: -149
Score: 15.3325 Sequence: GTGTGTAGAGGT-(6)-GGCAGCACAGTA-(18)-ATCTGTATATGG
Locus tag: Pnap_2630
Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Pnap_2631
Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: Pnap_2632
Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: Pnap_2633
Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Pnap_2634
Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Pnap_2635
Name: speB Funciton: Agmatinase (EC 3.5.3.11)
Locus tag: Pnap_2636
Name: gabD Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
||||
| gabT-gbtA-gbtD-gbtB-gbtC-speB-gabD | -149 | 15.3 | GTGTGTAGAGGT-(6)-GGCAGCACAGTA-(18)-ATCTGTATATGG | Pnap_2630 |
| Polaromonas sp. JS666 | ||||
|
Position: -122
Score: 14.8333 Sequence: CCATGTACAGCA-(6)-ACCCGCACAGTG-(17)-AGCTGTACATGG
Locus tag: Bpro_2912
Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Bpro_2913
Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: Bpro_2914
Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: Bpro_2915
Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Bpro_2916
Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component |
||||
| gabT-gbtA-gbtD-gbtB-gbtC | -122 | 14.8 | CCATGTACAGCA-(6)-ACCCGCACAGTG-(17)-AGCTGTACATGG | Bpro_2912 |
| Rhodoferax ferrireducens DSM 15236 | ||||
|
Position: -126
Score: 15.3325 Sequence: GTATGTAGCGGT-(6)-GGCTGCACAGTG-(17)-ATCTGTATATGG
Locus tag: Rfer_0592
Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Rfer_0593
Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: Rfer_0594
Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: Rfer_0595
Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Rfer_0596
Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Rfer_0597
Name: speB Funciton: Agmatinase (EC 3.5.3.11)
Locus tag: Rfer_0598
Name: gabD Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
||||
| gabT-gbtA-gbtD-gbtB-gbtC-speB-gabD | -126 | 15.3 | GTATGTAGCGGT-(6)-GGCTGCACAGTG-(17)-ATCTGTATATGG | Rfer_0592 |
| Variovorax paradoxus S110 | ||||
|
Position: -120
Score: 14.8447 Sequence: GTATGTACAGGA-(6)-ACCAGTACAGTC-(17)-CGGTGTACATGG
Locus tag: Vapar_4695
Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Vapar_4696
Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: Vapar_4697
Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: Vapar_4698
Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Vapar_4699
Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Vapar_4700
Name: speB Funciton: Agmatinase (EC 3.5.3.11) |
||||
| gabT-gbtA-gbtD-gbtB-gbtC-speB | -120 | 14.8 | GTATGTACAGGA-(6)-ACCAGTACAGTC-(17)-CGGTGTACATGG | Vapar_4695 |