Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF00282 gene

Properties
Regulog: Cpin_4810 - Sphingobacteria
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Bacteroidetes
Built upon 9 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Chitinophaga pinensis DSM 2588
Position: -125
Score: 6.0236
Sequence: AACTGATCT-(22)-ATCTGGTCA
Position: -99
Score: 7.81167
Sequence: ATCTGATCT-(21)-ATCTGTTTT
Locus tag: Cpin_2925
Name: PF00282
Funciton: Pyridoxal-dependent decarboxylase
Locus tag: Cpin_2926
Name: PF00892
Funciton: Permeases of the drug/metabolite transporter (DMT) superfamily
PF00282-PF00892 -125 6 AACTGATCT-(22)-ATCTGGTCA Cpin_2925
-99 7.8 ATCTGATCT-(21)-ATCTGTTTT
Dyadobacter fermentans DSM 18053
Position: -116
Score: 7.36397
Sequence: AGCTGTTCT-(21)-ATCTGTTAT
Position: -86
Score: 8.42024
Sequence: ATCTGTTAT-(21)-ATCTGTTTT
Locus tag: Dfer_1183
Name: PF00892
Funciton: Permeases of the drug/metabolite transporter (DMT) superfamily
Locus tag: Dfer_1182
Name: PF07609
Funciton: hypothetical protein
Locus tag: Dfer_1181
Name: PF00282
Funciton: Pyridoxal-dependent decarboxylase
PF00892-PF07609-PF00282 -116 7.4 AGCTGTTCT-(21)-ATCTGTTAT Dfer_1183
-86 8.4 ATCTGTTAT-(21)-ATCTGTTTT
Microscilla marina ATCC 23134
Position: -103
Score: 7.12411
Sequence: AACTGATAT-(22)-CTCTGTTTT
Position: -72
Score: 6.17586
Sequence: CTCTGTTTT-(22)-TTGTGTAAT
Locus tag: M23134_05127
Name: PF00282
Funciton: Pyridoxal-dependent decarboxylase
PF00282 -103 7.1 AACTGATAT-(22)-CTCTGTTTT M23134_05127
-72 6.2 CTCTGTTTT-(22)-TTGTGTAAT
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