Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pcaC gene

Properties
Regulog: Nfa21130 - Nocardiaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Actinobacteria
Built upon 4 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Nocardia farcinica IFM 10152
Position: -69
Score: 9.33644
Sequence: GAAATGGCCCAT-(12)-GGAATGGACCAT
Locus tag: nfa21120
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
pcaC -69 9.3 GAAATGGCCCAT-(12)-GGAATGGACCAT nfa21120
Rhodococcus erythropolis PR4
Position: -69
Score: 9.0909
Sequence: AGATTGGCCCAT-(12)-GGATTGAACCAT
Locus tag: RER_05320
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
pcaC -69 9.1 AGATTGGCCCAT-(12)-GGATTGAACCAT RER_05320
Rhodococcus opacus B4
Position: -69
Score: 9.23
Sequence: GAATTGGCCCAA-(12)-GAATTGAACCAC
Locus tag: ROP_51340
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
pcaC -69 9.2 GAATTGGCCCAA-(12)-GAATTGAACCAC ROP_51340
Rhodococcus sp. RHA1
Position: -27
Score: 9.51894
Sequence: GAATTGGCCCAA-(12)-GAATTGAACCAT
Locus tag: RHA1_ro05073
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
pcaC -27 9.5 GAATTGGCCCAA-(12)-GAATTGAACCAT RHA1_ro05073
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