Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing phzF gene

Properties
Regulog: Daci_0595 - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Proteobacteria/Beta
Built upon 11 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -130
Score: 15.108
Sequence: GAACTGTGTTG-(10)-CGGCACAGTTC-(15)-TGTCTGTATTG-(0)-GCACTGTAGCG
Locus tag: Aave_4435
Name: PF01810
Funciton: Transporter, LysE family
Locus tag: Aave_4436
Name: PF00892
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Aave_4437
Name: COG1167
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: Aave_4438
Name: Bpro_4241
Funciton: Glutathione S-transferase domain protein
Locus tag: Aave_4439
Name: phzF
Funciton: Phenazine biosynthesis protein PhzF
Locus tag: Aave_4440
Name: Aave_4440
Funciton: Riboflavin-specific deaminase
Locus tag: Aave_4441
Name: Aave_4441
Funciton: Pyridoxal-5'-phosphate-dependent enzyme, threonine dehydratase (EC 4.3.1.19)
PF01810-PF00892-COG1167-Bpro_4241-phzF-Aave_4440-Aave_4441 -130 15.1 GAACTGTGTTG-(10)-CGGCACAGTTC-(15)-TGTCTGTATTG-(0)-GCACTGTAGCG Aave_4435
Acidovorax sp. JS42
Position: -125
Score: 15.7734
Sequence: GCACTGTGCCA-(10)-CGATACAGTGC-(16)-TGACTGTATTG-(0)-GTACTGTAATG
Locus tag: Ajs_3843
Name: PF01810
Funciton: Transporter, LysE family
Locus tag: Ajs_3844
Name: PF00892
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Ajs_3845
Name: COG1167
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: Ajs_3846
Name: phzF
Funciton: Phenazine biosynthesis protein PhzF
Locus tag: Ajs_3847
Name: Aave_4441
Funciton: Pyridoxal-5'-phosphate-dependent enzyme, threonine dehydratase (EC 4.3.1.19)
PF01810-PF00892-COG1167-phzF-Aave_4441 -125 15.8 GCACTGTGCCA-(10)-CGATACAGTGC-(16)-TGACTGTATTG-(0)-GTACTGTAATG Ajs_3843
Comamonas testosteroni KF-1
Position: -369
Score: 15.008
Sequence: GAACTGTATTG-(10)-CAATACAGAAG-(15)-TGTCTGTATAG-(0)-GTACTGTAATG
Locus tag: CtesDRAFT_4335
Name: COG1167
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: CtesDRAFT_4334
Name: phzF
Funciton: Phenazine biosynthesis protein PhzF
COG1167-phzF -369 15 GAACTGTATTG-(10)-CAATACAGAAG-(15)-TGTCTGTATAG-(0)-GTACTGTAATG CtesDRAFT_4335
Methylibium petroleiphilum PM1
Position: -93
Score: 15.8271
Sequence: GGCGTGTGTCG-(10)-CAGTACAGATC-(15)-ATTCTGTACTG-(0)-TTAGTGTATTG
Locus tag: Mpe_A0184
Name: PF00892
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Mpe_A0185
Name: racX
Funciton: Uncharacterized protein YgeA of aspartate/glutamate/hydantoin racemase family
Locus tag: Mpe_A0186
Name: COG1167
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: Mpe_A0187
Name: phzF
Funciton: Phenazine biosynthesis protein PhzF
PF00892-racX-COG1167-phzF -93 15.8 GGCGTGTGTCG-(10)-CAGTACAGATC-(15)-ATTCTGTACTG-(0)-TTAGTGTATTG Mpe_A0184
Polaromonas naphthalenivorans CJ2
Position: -197
Score: 16.3651
Sequence: GCCGTGTGCTG-(10)-CAATACAGTTT-(15)-AAACTGTATTG-(0)-GTGGTGTGCTG
Locus tag: Pnap_0402
Name: PF00892
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Pnap_0401
Name: COG1167
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: Pnap_0400
Name: phzF
Funciton: Phenazine biosynthesis protein PhzF
PF00892-COG1167-phzF -197 16.4 GCCGTGTGCTG-(10)-CAATACAGTTT-(15)-AAACTGTATTG-(0)-GTGGTGTGCTG Pnap_0402
Polaromonas sp. JS666
Position: -92
Score: 16.9909
Sequence: TAAGTGTGCCG-(10)-CAATACAGTTT-(15)-CAACTGTATTG-(0)-GTAGTGTGCTG
Locus tag: Bpro_4234
Name: PF01810
Funciton: Transporter, LysE family
Locus tag: Bpro_4235
Name: PF00892
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Bpro_4236
Name: CtesDRAFT_4179
Funciton: antibiotic biosynthesis monooxygenase
Locus tag: Bpro_4237
Name: null
Funciton: hypothetical protein
Locus tag: Bpro_4238
Name: Aave_4745
Funciton: ThiJ/PfpI family protein
Locus tag: Bpro_4239
Name: null
Funciton: hypothetical protein
Locus tag: Bpro_4240
Name: COG1167
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: Bpro_4241
Name: Bpro_4241
Funciton: Glutathione S-transferase domain protein
Locus tag: Bpro_4242
Name: phzF
Funciton: Phenazine biosynthesis protein PhzF
Locus tag: Bpro_4243
Name: Aave_4440
Funciton: Riboflavin-specific deaminase
Locus tag: Bpro_4244
Name: PF01810
Funciton: Transporter, LysE family
Locus tag: Bpro_4245
Name: Aave_4441
Funciton: Pyridoxal-5'-phosphate-dependent enzyme, threonine dehydratase (EC 4.3.1.19)
PF01810-PF00892-CtesDRAFT_4179-Bpro_4237-Aave_4745-Bpro_4239-COG1167-Bpro_4241-phzF-Aave_4440-PF01810-Aave_4441 -92 17 TAAGTGTGCCG-(10)-CAATACAGTTT-(15)-CAACTGTATTG-(0)-GTAGTGTGCTG Bpro_4234
Rhodoferax ferrireducens DSM 15236
Position: -114
Score: 16.9844
Sequence: AACCTGTGTTG-(10)-CAATACAGCTC-(15)-CAAGTGTACTG-(0)-CCAGTGTATTG
Locus tag: Rfer_3726
Name: PF01810
Funciton: Transporter, LysE family
Locus tag: Rfer_3727
Name: racX
Funciton: Uncharacterized protein YgeA of aspartate/glutamate/hydantoin racemase family
Locus tag: Rfer_3728
Name: PF00892
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Rfer_3729
Name: COG1167
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: Rfer_3730
Name: Bpro_4241
Funciton: Glutathione S-transferase domain protein
Locus tag: Rfer_3731
Name: phzF
Funciton: Phenazine biosynthesis protein PhzF
PF01810-racX-PF00892-COG1167-Bpro_4241-phzF -114 17 AACCTGTGTTG-(10)-CAATACAGCTC-(15)-CAAGTGTACTG-(0)-CCAGTGTATTG Rfer_3726
Variovorax paradoxus S110
Position: -93
Score: 16.3763
Sequence: CTTCTGTGTCG-(10)-CAATACAGTTT-(15)-CAACTGTATCG-(0)-GAACTGTAATG
Locus tag: Vapar_0747
Name: PF01810
Funciton: Transporter, LysE family
Locus tag: Vapar_0746
Name: PF00892
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Vapar_0745
Name: COG1167
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: Vapar_0744
Name: Aave_4745
Funciton: ThiJ/PfpI family protein
Locus tag: Vapar_0743
Name: PF01810
Funciton: Transporter, LysE family
Locus tag: Vapar_0742
Name: Bpro_4241
Funciton: Glutathione S-transferase domain protein
Locus tag: Vapar_0741
Name: phzF
Funciton: Phenazine biosynthesis protein PhzF
Locus tag: Vapar_0740
Name: Aave_4440
Funciton: Riboflavin-specific deaminase
Locus tag: Vapar_0739
Name: PF01810
Funciton: Transporter, LysE family
Locus tag: Vapar_0738
Name: Aave_4441
Funciton: Pyridoxal-5'-phosphate-dependent enzyme, threonine dehydratase (EC 4.3.1.19)
PF01810-PF00892-COG1167-Aave_4745-PF01810-Bpro_4241-phzF-Aave_4440-PF01810-Aave_4441 -93 16.4 CTTCTGTGTCG-(10)-CAATACAGTTT-(15)-CAACTGTATCG-(0)-GAACTGTAATG Vapar_0747
© 2009-2020 RegPrecise