Orthologous regulated operons containing usp gene

Properties
Regulog:	DosR - Actinomycetales
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	activator
Biological process:	Dormancy
Effector:	Oxygen; Carbon monoxide; Nitric oxide
Phylum:	Actinobacteria

Built upon 299 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Mycobacterium bovis AF2122/97
Position: -138 Score: 4.61 Sequence: CAGGGTCAATGGTCCCCA Position: -81 Score: 4.55 Sequence: CGGGGACTTCTGTCCCTA Locus tag: Mb2057c Name: hspX Funciton: heat shock protein HspX_1 Locus tag: Mb2056c Name: Mb2055c Funciton: Erythromycin esterase Locus tag: Mb2055c Name: Mb2055c Funciton: Erythromycin esterase Locus tag: Mb2054c Name: pfkB Funciton: probable phosphofructokinase Locus tag: Mb2053c Name: usp Funciton: universal stress protein Locus tag: Mb2052c Name: dosT Funciton: two-component system sensor kinase, DosT Locus tag: Mb2051c Name: usp Funciton: universal stress protein Locus tag: Mb2050c Name: Rv2025c Funciton: hypotetical protein
hspX-Mb2055c-Mb2055c-pfkB-usp-dosT-usp-Rv2025c	-138	4.6	CAGGGTCAATGGTCCCCA	Mb2057c
	-81	4.6	CGGGGACTTCTGTCCCTA
Mycobacterium smegmatis str. MC2 155
Position: -80 Score: 4.7 Sequence: AAAGGACCAAAGGCCCTT Locus tag: MSMEG_3950 Name: usp Funciton: universal stress protein Locus tag: MSMEG_3952 Name: null Funciton: hypothetical protein
usp-MSMEG_3952	-80	4.7	AAAGGACCAAAGGCCCTT	MSMEG_3950
Mycobacterium sp. MCS
Position: -102 Score: 3.74 Sequence: CATGGTCTTTGGTCCTCC Locus tag: Mmcs_1104 Name: usp Funciton: universal stress protein Locus tag: Mmcs_1103 Name: Mmcs_1103 Funciton: MgtE integral membrane region
usp-Mmcs_1103	-102	3.7	CATGGTCTTTGGTCCTCC	Mmcs_1104
Mycobacterium tuberculosis H37Rv
Position: -138 Score: 4.61 Sequence: CAGGGTCAATGGTCCCCA Position: -81 Score: 4.55 Sequence: CGGGGACTTCTGTCCCTA Locus tag: Rv2031c Name: hspX Funciton: heat shock protein HspX_1 Locus tag: Rv2030c Name: Mb2055c Funciton: Erythromycin esterase Locus tag: Rv2029c Name: pfkB Funciton: probable phosphofructokinase Locus tag: Rv2028c Name: usp Funciton: universal stress protein Locus tag: Rv2027c Name: dosT Funciton: two-component system sensor kinase, DosT Locus tag: Rv2026c Name: usp Funciton: universal stress protein Locus tag: Rv2025c Name: Rv2025c Funciton: hypotetical protein
hspX-Mb2055c-pfkB-usp-dosT-usp-Rv2025c	-138	4.6	CAGGGTCAATGGTCCCCA	Rv2031c
	-81	4.6	CGGGGACTTCTGTCCCTA
Mycobacterium ulcerans Agy99
Position: -138 Score: 4.2 Sequence: TGGGGTCCATGGACTCTG Locus tag: MUL_2236 Name: usp Funciton: universal stress protein
usp	-138	4.2	TGGGGTCCATGGACTCTG	MUL_2236
Mycobacterium vanbaalenii PYR-1
Position: -52 Score: 4.27 Sequence: CGATGACCTTAGGCCCTA Locus tag: Mvan_1377 Name: null Funciton: hypothetical protein Locus tag: Mvan_1378 Name: usp Funciton: universal stress protein Locus tag: Mvan_1379 Name: null Funciton: putative conserved transmembrane protein Locus tag: Mvan_1380 Name: Mmcs_1073 Funciton: alcohol dehydrogenase GroES-like protein Locus tag: Mvan_1381 Name: usp Funciton: universal stress protein
Mvan_1377-usp-Mvan_1379-Mmcs_1073-usp	-52	4.3	CGATGACCTTAGGCCCTA	Mvan_1377

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing usp gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --