Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glyA gene

Properties
Regulog: MetR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Methionine biosynthesis
Effector: Homocysteine
Phylum: Proteobacteria/Gamma
Built upon 117 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -120
Score: 3.73724
Sequence: ATGAAACACAGTCAT
Locus tag: Sama_1014
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -120 3.7 ATGAAACACAGTCAT Sama_1014
Shewanella baltica OS155
Position: -120
Score: 4.4379
Sequence: ATGAGCCAAGTTCAA
Locus tag: Sbal_3162
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -120 4.4 ATGAGCCAAGTTCAA Sbal_3162
Shewanella frigidimarina NCIMB 400
Position: -212
Score: 3.7102
Sequence: ATGTGCTGAACTCAA
Locus tag: Sfri_1033
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -212 3.7 ATGTGCTGAACTCAA Sfri_1033
Shewanella halifaxensis HAW-EB4
Position: -119
Score: 3.98091
Sequence: ACGAAACTCTCTCAT
Locus tag: Shal_1203
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -119 4 ACGAAACTCTCTCAT Shal_1203
Shewanella loihica PV-4
Position: -122
Score: 3.98567
Sequence: ATGAACATTTCTCAG
Locus tag: Shew_1185
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -122 4 ATGAACATTTCTCAG Shew_1185
Shewanella oneidensis MR-1
Position: -120
Score: 4.25634
Sequence: TTGAGGTGCATTCAA
Locus tag: SO3471
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -120 4.3 TTGAGGTGCATTCAA SO3471
Shewanella pealeana ATCC 700345
Position: -119
Score: 4.03362
Sequence: ACGAAACTCACTCAT
Locus tag: Spea_1160
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -119 4 ACGAAACTCACTCAT Spea_1160
Shewanella piezotolerans WP3
Position: -119
Score: 4.0284
Sequence: ATAAGTTTAACTCAT
Locus tag: swp_1337
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -119 4 ATAAGTTTAACTCAT swp_1337
Shewanella putrefaciens CN-32
Position: -120
Score: 4.4379
Sequence: ATGAGCCAAGTTCAA
Locus tag: Sputcn32_2780
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -120 4.4 ATGAGCCAAGTTCAA Sputcn32_2780
Shewanella sediminis HAW-EB3
Position: -218
Score: 4.41611
Sequence: TTGAATTGTCTTCAA
Position: -199
Score: 4.05321
Sequence: ATGAGTTTCCTTCGA
Locus tag: Ssed_1271
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -218 4.4 TTGAATTGTCTTCAA Ssed_1271
-199 4.1 ATGAGTTTCCTTCGA
Shewanella sp ANA-3
Position: -120
Score: 4.16325
Sequence: TTGAGGCGAGTTCAA
Locus tag: Shewana3_1094
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -120 4.2 TTGAGGCGAGTTCAA Shewana3_1094
Shewanella sp MR-4
Position: -120
Score: 4.16325
Sequence: TTGAGGCGAGTTCAA
Locus tag: Shewmr4_1094
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -120 4.2 TTGAGGCGAGTTCAA Shewmr4_1094
Shewanella sp MR-7
Position: -120
Score: 4.16325
Sequence: TTGAGGCGAGTTCAA
Locus tag: Shewmr7_1160
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -120 4.2 TTGAGGCGAGTTCAA Shewmr7_1160
Shewanella sp W3-18-1
Position: -120
Score: 4.4379
Sequence: ATGAGCCAAGTTCAA
Locus tag: Sputw3181_1232
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -120 4.4 ATGAGCCAAGTTCAA Sputw3181_1232
Shewanella woodyi ATCC 51908
Position: -119
Score: 4.09708
Sequence: GTGAGTCATGTTCAT
Locus tag: Swoo_1380
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA -119 4.1 GTGAGTCATGTTCAT Swoo_1380
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