Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ureD gene

Properties
Regulog: UreR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Gamma
Built upon 22 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas mendocina ymp
Position: -286
Score: 4.09512
Sequence: ACTGTTCGGGCCGGT
Position: -277
Score: 4.72863
Sequence: GCCGGTCAGTCCAGT
Position: -138
Score: 5.24212
Sequence: ACTGTTCAGACCAGT
Locus tag: Pmen_0306
Name: ureA
Funciton: Amino acid ABC transporter, periplasmic amino acid-binding protein
Locus tag: Pmen_0305
Name: ureB
Funciton: Amino acid ABC transporter, permease protein
Locus tag: Pmen_0304
Name: ureC
Funciton: Amino acid ABC transporter, permease protein
Locus tag: Pmen_0303
Name: ureD
Funciton: Amino acid ABC transporter, ATP-binding protein
Locus tag: Pmen_0302
Name: ureH
Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
ureA-ureB-ureC-ureD-ureH -286 4.1 ACTGTTCGGGCCGGT Pmen_0306
-277 4.7 GCCGGTCAGTCCAGT
-138 5.2 ACTGTTCAGACCAGT
Pseudomonas syringae pv. tomato str. DC3000
Position: -249
Score: 4.57836
Sequence: ACTGTTCAGGCCAGT
Position: -240
Score: 4.06487
Sequence: GCCAGTCAGTCCAGT
Position: -124
Score: 5.90588
Sequence: ACTGGTCAGACCAGT
Locus tag: PSPTO5245
Name: ureA
Funciton: Amino acid ABC transporter, periplasmic amino acid-binding protein
Locus tag: PSPTO5246
Name: ureB
Funciton: Amino acid ABC transporter, permease protein
Locus tag: PSPTO5247
Name: ureC
Funciton: Amino acid ABC transporter, permease protein
Locus tag: PSPTO5248
Name: ureD
Funciton: Amino acid ABC transporter, ATP-binding protein
ureA-ureB-ureC-ureD -249 4.6 ACTGTTCAGGCCAGT PSPTO5245
-240 4.1 GCCAGTCAGTCCAGT
-124 5.9 ACTGGTCAGACCAGT
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