Orthologous regulated operons containing rbsD gene
| Regulog: | RbsR2 - Staphylococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Ribose utilization |
| Effector: | Ribose |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | ||||
|
Position: -88
Score: 4.52793 Sequence: TTATGAAAACGCATGCATTT
Locus tag: SA0260
Name: rbsU Funciton: Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5)
Locus tag: SA0259
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: SA0258
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) |
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| rbsU-rbsD-rbsK | -88 | 4.5 | TTATGAAAACGCATGCATTT | SA0260 |
| Staphylococcus carnosus subsp. carnosus TM300 | ||||
|
Position: -103
Score: 5.42855 Sequence: ATATGAAAGCGTATACATAT
Locus tag: Sca_2421
Name: rbsU Funciton: Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5)
Locus tag: Sca_2420
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: Sca_2419
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) |
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| rbsU-rbsD-rbsK | -103 | 5.4 | ATATGAAAGCGTATACATAT | Sca_2421 |
| Staphylococcus epidermidis ATCC 12228 | ||||
|
Position: -270
Score: 4.71616 Sequence: GTAGGTAACCGTTAAAATAA
Locus tag: SE2088
Name: rbsU Funciton: Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5)
Locus tag: SE2087
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: SE2086
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) |
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| rbsU-rbsD-rbsK | -270 | 4.7 | GTAGGTAACCGTTAAAATAA | SE2088 |
| Staphylococcus haemolyticus JCSC1435 | ||||
|
Position: -33
Score: 6.61836 Sequence: TCATGTAAGCGGTTACATAA
Locus tag: SH0174
Name: rbsR2 Funciton: Transcriptional repressor of ribose utilization RbsR2, LacI family
Locus tag: SH0175
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: SH0176
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: SH0177
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: SH0178
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: SH0179
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) |
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| rbsR2-rbsK-rbsD-rbsA-rbsC-rbsB | -33 | 6.6 | TCATGTAAGCGGTTACATAA | SH0174 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | ||||
|
Position: -35
Score: 6.68713 Sequence: TTATGTAACGGGTTACATAT
Locus tag: SSP1395
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: SSP1394
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: SSP1393
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: SSP1392
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) |
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| rbsD-rbsA-rbsC-rbsB | -35 | 6.7 | TTATGTAACGGGTTACATAT | SSP1395 |