Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ebgC gene

Properties
Regulog: EbgR - Vibrionales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization
Effector: Beta-galactosides
Phylum: Proteobacteria/gamma
Built upon 30 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -332
Score: 5.51316
Sequence: TTGTATTTTACTAAAATTTAA
Position: -78
Score: 4.27578
Sequence: AACAGATTTACCAATTTATTT
Position: -65
Score: 5.85953
Sequence: ATTTATTTTACTAAAACTTTA
Position: -53
Score: 4.2333
Sequence: AAAACTTTAACTAACATAGCT
Locus tag: PBPRA2084
Name: ebgA
Funciton: Evolved beta-D-galactosidase, alpha subunit
Locus tag: PBPRA2085
Name: ebgC
Funciton: Evolved beta-D-galactosidase, beta subunit
Locus tag: PBPRA2086
Name: ygjI
Funciton: predicted beta-galactoside transporter, AAP family
ebgA-ebgC-ygjI -332 5.5 TTGTATTTTACTAAAATTTAA PBPRA2084
-78 4.3 AACAGATTTACCAATTTATTT
-65 5.9 ATTTATTTTACTAAAACTTTA
-53 4.2 AAAACTTTAACTAACATAGCT
Vibrio angustum S14
Position: -118
Score: 4.27045
Sequence: AACGTTTTCACTAATTTATTT
Position: -105
Score: 6.05123
Sequence: ATTTATTTTAGTAAAACTTTT
Position: -93
Score: 5.7158
Sequence: AAAACTTTTACTAAAATCGTT
Locus tag: VAS14_15114
Name: ebgA
Funciton: Evolved beta-D-galactosidase, alpha subunit
Locus tag: VAS14_15109
Name: ebgC
Funciton: Evolved beta-D-galactosidase, beta subunit
Locus tag: VAS14_15104
Name: ygjI
Funciton: predicted beta-galactoside transporter, AAP family
ebgA-ebgC-ygjI -118 4.3 AACGTTTTCACTAATTTATTT VAS14_15114
-105 6.1 ATTTATTTTAGTAAAACTTTT
-93 5.7 AAAACTTTTACTAAAATCGTT
Vibrio fischeri ES114
Position: -107
Score: 5.74268
Sequence: ATTTGTTTTACTAAAACTTTA
Position: -96
Score: 4.45474
Sequence: TAAAACTTTAGTTAATATCTT
Position: -67
Score: 4.25079
Sequence: GAGTTATTTACTACGATTTAT
Locus tag: VF_A0347
Name: ebgA
Funciton: Evolved beta-D-galactosidase, alpha subunit
Locus tag: VF_A0346
Name: ebgC
Funciton: Evolved beta-D-galactosidase, beta subunit
Locus tag: VF_A0345
Name: ygjI
Funciton: predicted beta-galactoside transporter, AAP family
ebgA-ebgC-ygjI -107 5.7 ATTTGTTTTACTAAAACTTTA VF_A0347
-96 4.5 TAAAACTTTAGTTAATATCTT
-67 4.3 GAGTTATTTACTACGATTTAT
Vibrio parahaemolyticus RIMD 2210633
Position: -168
Score: 4.27045
Sequence: AACGTTTTCACTAATTTATTT
Position: -155
Score: 6.05123
Sequence: ATTTATTTTAGTAAAACTTTT
Position: -143
Score: 5.69517
Sequence: AAAACTTTTACTAATATCTTT
Locus tag: VP2403
Name: ebgA
Funciton: Evolved beta-D-galactosidase, alpha subunit
Locus tag: VP2404
Name: ebgC
Funciton: Evolved beta-D-galactosidase, beta subunit
ebgA-ebgC -168 4.3 AACGTTTTCACTAATTTATTT VP2403
-155 6.1 ATTTATTTTAGTAAAACTTTT
-143 5.7 AAAACTTTTACTAATATCTTT
Vibrio shilonii AK1
Position: -98
Score: 6.21684
Sequence: ATATATTTTAGTAAAACTTTT
Position: -86
Score: 5.60403
Sequence: AAAACTTTTACTAAAATTACC
Locus tag: VSAK1_18704
Name: ebgA
Funciton: Evolved beta-D-galactosidase, alpha subunit
Locus tag: VSAK1_18709
Name: ebgC
Funciton: Evolved beta-D-galactosidase, beta subunit
Locus tag: VSAK1_18714
Name: ygjI
Funciton: predicted beta-galactoside transporter, AAP family
ebgA-ebgC-ygjI -98 6.2 ATATATTTTAGTAAAACTTTT VSAK1_18704
-86 5.6 AAAACTTTTACTAAAATTACC
Vibrio vulnificus CMCP6
Position: -107
Score: 5.22269
Sequence: ATTCTATTTAGTAAAAGTTTT
Position: -95
Score: 5.90566
Sequence: AAAAGTTTTACTAATATATTT
Locus tag: VV1_1767
Name: ebgA
Funciton: Evolved beta-D-galactosidase, alpha subunit
Locus tag: VV1_1766
Name: ebgC
Funciton: Evolved beta-D-galactosidase, beta subunit
Locus tag: VV1_1765
Name: ygjI
Funciton: predicted beta-galactoside transporter, AAP family
Locus tag: VV1_1764
Name: ygjI
Funciton: predicted beta-galactoside transporter, AAP family
Locus tag: VV1_1763
Name: SSF48208
Funciton: putative glucosyl hydrolase precursor
ebgA-ebgC-ygjI-ygjI-SSF48208 -107 5.2 ATTCTATTTAGTAAAAGTTTT VV1_1767
-95 5.9 AAAAGTTTTACTAATATATTT
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