Orthologous regulated operons containing rbsB gene

Properties
Regulog:	RbsR - Pseudomonadaceae
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Ribose utilization
Effector:	Ribose
Phylum:	Proteobacteria/gamma

Built upon 5 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Pseudomonas aeruginosa PAO1
Position: -76 Score: 6.5259 Sequence: TAACGCAAACGTTTGCGTCT Locus tag: PA1946 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: PA1947 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: PA1948 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: PA1949 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family Locus tag: PA1950 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
rbsB-rbsA-rbsC-rbsR-rbsK	-76	6.5	TAACGCAAACGTTTGCGTCT	PA1946
Pseudomonas entomophila L48
Position: -52 Score: 6.55293 Sequence: CACCGCAAACGTTTGCGATC Locus tag: PSEEN1952 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: PSEEN1953 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: PSEEN1954 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: PSEEN1955 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family Locus tag: PSEEN1956 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: PSEEN1957 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: PSEEN1958 Name: uriH Funciton: Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)
rbsB-rbsA-rbsC-rbsR-rbsK-rbsD-uriH	-52	6.6	CACCGCAAACGTTTGCGATC	PSEEN1952
Pseudomonas fluorescens Pf-5
Position: -140 Score: 6.29544 Sequence: TTACGCAAACGTTTGCGCGG Locus tag: PFL_2101 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: PFL_2102 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: PFL_2103 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: PFL_2104 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family Locus tag: PFL_2105 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: PFL_2106 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: PFL_2107 Name: uriH Funciton: Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)
rbsB-rbsA-rbsC-rbsR-rbsK-rbsD-uriH	-140	6.3	TTACGCAAACGTTTGCGCGG	PFL_2101
Pseudomonas putida KT2440
Position: -53 Score: 6.44527 Sequence: CAACGCAAACGTTTGCTATC Locus tag: PP2454 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: PP2455 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: PP2456 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: PP2457 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family Locus tag: PP2458 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: PP2459 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: PP2460 Name: uriH Funciton: Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)
rbsB-rbsA-rbsC-rbsR-rbsK-rbsD-uriH	-53	6.4	CAACGCAAACGTTTGCTATC	PP2454
Pseudomonas syringae pv. tomato str. DC3000
Position: -84 Score: 6.63194 Sequence: CCTCGCAAACGTTTGCGTGT Locus tag: PSPTO2367 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: PSPTO2368 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: PSPTO2369 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: PSPTO2370 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family Locus tag: PSPTO2371 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: PSPTO2372 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: PSPTO2373 Name: uriH Funciton: Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)
rbsB-rbsA-rbsC-rbsR-rbsK-rbsD-uriH	-84	6.6	CCTCGCAAACGTTTGCGTGT	PSPTO2367