Orthologous regulated operons containing rbsD gene

Properties
Regulog:	RbsR - Psychromonadaceae/Aeromonadales
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Ribose utilization
Effector:	Ribose
Phylum:	Proteobacteria/gamma

Built upon 8 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Position: -72 Score: 5.42914 Sequence: TGACGCAACCGGTTGCGTAA Locus tag: AHA_2309 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: AHA_2310 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: AHA_2311 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: AHA_2312 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: AHA_2313 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: AHA_2314 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR	-72	5.4	TGACGCAACCGGTTGCGTAA	AHA_2309
Aeromonas salmonicida subsp. salmonicida A449
Position: -75 Score: 5.42914 Sequence: TGACGCAACCGGTTGCGTAA Locus tag: ASA_1971 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
rbsD	-75	5.4	TGACGCAACCGGTTGCGTAA	ASA_1971
Moritella sp. PE36
Position: -94 Score: 5.60385 Sequence: CCATCGAAACGTTTGCGCAA Position: -82 Score: 5.60385 Sequence: TTGCGCAAACGTTTCGATGG Locus tag: PE36_05828 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: PE36_05823 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: PE36_05818 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: PE36_05813 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: PE36_05808 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: PE36_05803 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR	-94	5.6	CCATCGAAACGTTTGCGCAA	PE36_05828
	-82	5.6	TTGCGCAAACGTTTCGATGG
Psychromonas ingrahamii 37
Position: -107 Score: 5.60385 Sequence: CCATCGAAACGTTTGCGCAA Locus tag: Ping_0340 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: Ping_0341 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: Ping_0342 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: Ping_0343 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: Ping_0344 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: Ping_0345 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR	-107	5.6	CCATCGAAACGTTTGCGCAA	Ping_0340
Psychromonas sp. CNPT3
Position: -94 Score: 5.72743 Sequence: TTATCGAAACGTTTGCGCAA Position: -82 Score: 5.60385 Sequence: TTGCGCAAACGTTTCGATGG Locus tag: PCNPT3_07068 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: PCNPT3_07073 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: PCNPT3_07078 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: PCNPT3_07083 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: PCNPT3_07088 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: PCNPT3_07093 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR	-94	5.7	TTATCGAAACGTTTGCGCAA	PCNPT3_07068
	-82	5.6	TTGCGCAAACGTTTCGATGG