Orthologous regulated operons containing prpB gene
| Regulog: | PrpR - Vibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Photobacterium profundum SS9 | ||||
|
Position: -202
Score: 4.75411 Sequence: ATTGTCTACAGT
Position: -130
Score: 5.12525 Sequence: ACTGTCGACAAT
Position: -97
Score: 4.91067 Sequence: ATTGTTAACAAT
Position: -34
Score: 5.36427 Sequence: ATTGTTGACAAT
Locus tag: PBPRB0234
Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: PBPRB0235
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PBPRB0236
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PBPRB0237
Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
Locus tag: PBPRB0238
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
||||
| prpR-prpB-prpC-prpD-prpE | -202 | 4.8 | ATTGTCTACAGT | PBPRB0234 |
| -130 | 5.1 | ACTGTCGACAAT | ||
| -97 | 4.9 | ATTGTTAACAAT | ||
| -34 | 5.4 | ATTGTTGACAAT | ||
| Vibrio cholerae O1 biovar eltor str. N16961 | ||||
|
Position: -124
Score: 5.27921 Sequence: AGTGTCGACAAT
Position: -105
Score: 5.37784 Sequence: ATTGTCGACACT
Position: -36
Score: 3.67962 Sequence: GTTGTGAACAGT
Locus tag: VC1335
Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VC1336
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VC1337
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VC1338
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VC1339
Name: prpF Funciton: Aconitase accessory protein PrpF
Locus tag: VC1340
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
||||
| prpR-prpB-prpC-acnD-prpF-prpE | -124 | 5.3 | AGTGTCGACAAT | VC1335 |
| -105 | 5.4 | ATTGTCGACACT | ||
| -36 | 3.7 | GTTGTGAACAGT | ||
| Vibrio harveyi ATCC BAA-1116 | ||||
|
Position: -186
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -102
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -83
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -40
Score: 4.91757 Sequence: ATTGTTGACACT
Locus tag: VIBHAR_02398
Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VIBHAR_02397
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VIBHAR_02396
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VIBHAR_02395
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VIBHAR_02394
Name: prpF Funciton: Aconitase accessory protein PrpF
Locus tag: VIBHAR_02393
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
||||
| prpR-prpB-prpC-acnD-prpF-prpE | -186 | 5.8 | ATTGTCGACAAT | VIBHAR_02398 |
| -102 | 5.8 | ATTGTCGACAAT | ||
| -83 | 5.8 | ATTGTCGACAAT | ||
| -40 | 4.9 | ATTGTTGACACT | ||
| Vibrio parahaemolyticus RIMD 2210633 | ||||
|
Position: -196
Score: 5.36427 Sequence: GTTGTCGACAAT
Position: -102
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -83
Score: 5.37784 Sequence: ATTGTCGACACT
Position: -40
Score: 4.67855 Sequence: ATTGTAGACACT
Locus tag: VP1649
Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VP1648
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VP1647
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VP1646
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VP1645
Name: prpF Funciton: Aconitase accessory protein PrpF
Locus tag: VP1644
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
||||
| prpR-prpB-prpC-acnD-prpF-prpE | -196 | 5.4 | GTTGTCGACAAT | VP1649 |
| -102 | 5.8 | ATTGTCGACAAT | ||
| -83 | 5.4 | ATTGTCGACACT | ||
| -40 | 4.7 | ATTGTAGACACT | ||
| Vibrio shilonii AK1 | ||||
|
Position: -102
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -39
Score: 4.67165 Sequence: ACTGTCAACAAT
Locus tag: VSAK1_25705
Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VSAK1_25710
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VSAK1_25715
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VSAK1_25720
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VSAK1_25725
Name: prpF Funciton: Aconitase accessory protein PrpF
Locus tag: VSAK1_25730
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
||||
| prpR-prpB-prpC-acnD-prpF-prpE | -102 | 5.8 | ATTGTCGACAAT | VSAK1_25705 |
| -39 | 4.7 | ACTGTCAACAAT | ||
| Vibrio splendidus LGP32 | ||||
|
Position: -262
Score: 4.22495 Sequence: GTTGTCGACACA
Position: -107
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -88
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -45
Score: 4.37224 Sequence: GTTGTTGACAGT
Locus tag: VS_1342
Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VS_1343
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VS_1344
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VS_1345
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VS_1346
Name: prpF Funciton: Aconitase accessory protein PrpF
Locus tag: VS_1347
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
||||
| prpR-prpB-prpC-acnD-prpF-prpE | -262 | 4.2 | GTTGTCGACACA | VS_1342 |
| -107 | 5.8 | ATTGTCGACAAT | ||
| -88 | 5.8 | ATTGTCGACAAT | ||
| -45 | 4.4 | GTTGTTGACAGT | ||
| Vibrio vulnificus CMCP6 | ||||
|
Position: -99
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -80
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -37
Score: 4.13989 Sequence: ATTGTTGACAGA
Locus tag: VV1_2733
Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VV1_2732
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VV1_2731
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VV1_2730
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VV1_2729
Name: prpF Funciton: Aconitase accessory protein PrpF
Locus tag: VV1_2728
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
||||
| prpR-prpB-prpC-acnD-prpF-prpE | -99 | 5.8 | ATTGTCGACAAT | VV1_2733 |
| -80 | 5.8 | ATTGTCGACAAT | ||
| -37 | 4.1 | ATTGTTGACAGA | ||