Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing prpB gene

Properties
Regulog: PrpR - Vibrionales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Phylum: Proteobacteria/gamma
Built upon 24 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -202
Score: 4.75411
Sequence: ATTGTCTACAGT
Position: -130
Score: 5.12525
Sequence: ACTGTCGACAAT
Position: -97
Score: 4.91067
Sequence: ATTGTTAACAAT
Position: -34
Score: 5.36427
Sequence: ATTGTTGACAAT
Locus tag: PBPRB0234
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: PBPRB0235
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PBPRB0236
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PBPRB0237
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
Locus tag: PBPRB0238
Name: prpE
Funciton: Propionyl-CoA synthetase (EC 6.2.1.17)
prpR-prpB-prpC-prpD-prpE -202 4.8 ATTGTCTACAGT PBPRB0234
-130 5.1 ACTGTCGACAAT
-97 4.9 ATTGTTAACAAT
-34 5.4 ATTGTTGACAAT
Vibrio cholerae O1 biovar eltor str. N16961
Position: -124
Score: 5.27921
Sequence: AGTGTCGACAAT
Position: -105
Score: 5.37784
Sequence: ATTGTCGACACT
Position: -36
Score: 3.67962
Sequence: GTTGTGAACAGT
Locus tag: VC1335
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VC1336
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VC1337
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VC1338
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VC1339
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: VC1340
Name: prpE
Funciton: Propionyl-CoA synthetase (EC 6.2.1.17)
prpR-prpB-prpC-acnD-prpF-prpE -124 5.3 AGTGTCGACAAT VC1335
-105 5.4 ATTGTCGACACT
-36 3.7 GTTGTGAACAGT
Vibrio harveyi ATCC BAA-1116
Position: -186
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -102
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -83
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -40
Score: 4.91757
Sequence: ATTGTTGACACT
Locus tag: VIBHAR_02398
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VIBHAR_02397
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VIBHAR_02396
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VIBHAR_02395
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VIBHAR_02394
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: VIBHAR_02393
Name: prpE
Funciton: Propionyl-CoA synthetase (EC 6.2.1.17)
prpR-prpB-prpC-acnD-prpF-prpE -186 5.8 ATTGTCGACAAT VIBHAR_02398
-102 5.8 ATTGTCGACAAT
-83 5.8 ATTGTCGACAAT
-40 4.9 ATTGTTGACACT
Vibrio parahaemolyticus RIMD 2210633
Position: -196
Score: 5.36427
Sequence: GTTGTCGACAAT
Position: -102
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -83
Score: 5.37784
Sequence: ATTGTCGACACT
Position: -40
Score: 4.67855
Sequence: ATTGTAGACACT
Locus tag: VP1649
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VP1648
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VP1647
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VP1646
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VP1645
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: VP1644
Name: prpE
Funciton: Propionyl-CoA synthetase (EC 6.2.1.17)
prpR-prpB-prpC-acnD-prpF-prpE -196 5.4 GTTGTCGACAAT VP1649
-102 5.8 ATTGTCGACAAT
-83 5.4 ATTGTCGACACT
-40 4.7 ATTGTAGACACT
Vibrio shilonii AK1
Position: -102
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -39
Score: 4.67165
Sequence: ACTGTCAACAAT
Locus tag: VSAK1_25705
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VSAK1_25710
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VSAK1_25715
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VSAK1_25720
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VSAK1_25725
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: VSAK1_25730
Name: prpE
Funciton: Propionyl-CoA synthetase (EC 6.2.1.17)
prpR-prpB-prpC-acnD-prpF-prpE -102 5.8 ATTGTCGACAAT VSAK1_25705
-39 4.7 ACTGTCAACAAT
Vibrio splendidus LGP32
Position: -262
Score: 4.22495
Sequence: GTTGTCGACACA
Position: -107
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -88
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -45
Score: 4.37224
Sequence: GTTGTTGACAGT
Locus tag: VS_1342
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VS_1343
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VS_1344
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VS_1345
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VS_1346
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: VS_1347
Name: prpE
Funciton: Propionyl-CoA synthetase (EC 6.2.1.17)
prpR-prpB-prpC-acnD-prpF-prpE -262 4.2 GTTGTCGACACA VS_1342
-107 5.8 ATTGTCGACAAT
-88 5.8 ATTGTCGACAAT
-45 4.4 GTTGTTGACAGT
Vibrio vulnificus CMCP6
Position: -99
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -80
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -37
Score: 4.13989
Sequence: ATTGTTGACAGA
Locus tag: VV1_2733
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: VV1_2732
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: VV1_2731
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: VV1_2730
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: VV1_2729
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: VV1_2728
Name: prpE
Funciton: Propionyl-CoA synthetase (EC 6.2.1.17)
prpR-prpB-prpC-acnD-prpF-prpE -99 5.8 ATTGTCGACAAT VV1_2733
-80 5.8 ATTGTCGACAAT
-37 4.1 ATTGTTGACAGA
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