Orthologous regulated operons containing glcF gene

Properties
Regulog:	GlcC - Pseudomonadaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Glycolate utilization
Effector:	Glycolate
Phylum:	Proteobacteria/gamma

Built upon 24 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -255 Score: 4.40378 Sequence: AACTGGTAGGACCATGA Position: -157 Score: 5.31373 Sequence: AACTGGTATGACCAGCT Locus tag: Avin_43330 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: Avin_43320 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: Avin_43310 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: Avin_43300 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon Locus tag: Avin_43290 Name: glcB Funciton: Malate synthase G (EC 2.3.3.9)
glcD-glcE-glcF-glcG-glcB	-255	4.4	AACTGGTAGGACCATGA	Avin_43330
	-157	5.3	AACTGGTATGACCAGCT
Pseudomonas aeruginosa PAO1
Position: -190 Score: 4.58113 Sequence: CGCTGGTAGGACCAGTT Position: -103 Score: 5.18678 Sequence: TACTGGTAGGACCAGTT Locus tag: PA5355 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: PA5354 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: PA5353 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: PA5352 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon
glcD-glcE-glcF-glcG	-190	4.6	CGCTGGTAGGACCAGTT	PA5355
	-103	5.2	TACTGGTAGGACCAGTT
Pseudomonas fluorescens Pf-5
Position: -222 Score: 4.30229 Sequence: CACTGGTATGACCAGCC Position: -115 Score: 4.59557 Sequence: AAGTGGTTCGACCACTG Locus tag: PFL_2269 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: PFL_2268 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: PFL_2267 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: PFL_2266 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon
glcD-glcE-glcF-glcG	-222	4.3	CACTGGTATGACCAGCC	PFL_2269
	-115	4.6	AAGTGGTTCGACCACTG
Pseudomonas mendocina ymp
Position: -224 Score: 6.13829 Sequence: AACTGGTCGTACCAGTT Position: -115 Score: 6.04131 Sequence: AACTGGTCATACCAGCA Locus tag: Pmen_0203 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: Pmen_0202 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: Pmen_0201 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: Pmen_0200 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon Locus tag: Pmen_0199 Name: glcB Funciton: Malate synthase G (EC 2.3.3.9)
glcD-glcE-glcF-glcG-glcB	-224	6.1	AACTGGTCGTACCAGTT	Pmen_0203
	-115	6	AACTGGTCATACCAGCA
Pseudomonas putida KT2440
Position: -182 Score: 4.17004 Sequence: TGCTGGTAGGACCACTT Position: -107 Score: 5.1314 Sequence: AACTGGTAGGACCAGTC Locus tag: PP3745 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: PP3746 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: PP3747 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: PP3748 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon
glcD-glcE-glcF-glcG	-182	4.2	TGCTGGTAGGACCACTT	PP3745
	-107	5.1	AACTGGTAGGACCAGTC
Pseudomonas stutzeri A1501
Position: -222 Score: 5.15644 Sequence: AGCTGGTAGGACCAGTT Position: -115 Score: 5.56753 Sequence: AACTGGTAGGACCAGTT Locus tag: PST_0431 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: PST_0432 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: PST_0433 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: PST_0434 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon Locus tag: PST_0435 Name: glcB Funciton: Malate synthase G (EC 2.3.3.9)
glcD-glcE-glcF-glcG-glcB	-222	5.2	AGCTGGTAGGACCAGTT	PST_0431
	-115	5.6	AACTGGTAGGACCAGTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing glcF gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --