Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xylB gene

Properties
Regulog: XylR - Rhizobiales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose
Phylum: Proteobacteria/Alpha
Built upon 17 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -72
Score: 6.28367
Sequence: TATGAGGTACGTACATCATT
Locus tag: Atu4481
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: Atu4482
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylR-xylB -72 6.3 TATGAGGTACGTACATCATT Atu4481
Bradyrhizobium japonicum USDA 110
Position: -42
Score: 5.70999
Sequence: AATGAGTTGCGTACCTCAAA
Locus tag: blr1118
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: blr1119
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: blr1120
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: blr1121
Name: xylG
Funciton: Xylose ABC transporter, ATP-binding protein XylG
Locus tag: blr1122
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: blr1123
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
xylR-xylB-xylA-xylG-xylH-xylF -42 5.7 AATGAGTTGCGTACCTCAAA blr1118
Bradyrhizobium sp. BTAi1
Position: -58
Score: 5.14317
Sequence: AATGAGTTGCGCACCTCAAA
Locus tag: BBta_2712
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: BBta_2713
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BBta_2714
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BBta_2715
Name: xylG
Funciton: Xylose ABC transporter, ATP-binding protein XylG
Locus tag: BBta_2716
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: BBta_2717
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
xylR-xylB-xylA-xylG-xylH-xylF -58 5.1 AATGAGTTGCGCACCTCAAA BBta_2712
Brucella melitensis 16M
Position: -52
Score: 6.31375
Sequence: TTTGATTTACGTACCTCATT
Locus tag: BMEI1385
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: BMEI1386
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BMEI1387
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylR-xylB-xylA -52 6.3 TTTGATTTACGTACCTCATT BMEI1385
Rhizobium etli CFN 42
Position: -51
Score: 6.57698
Sequence: TTTGATTTACGTACATCAAA
Locus tag: RHE_CH03650
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: RHE_CH03649
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: RHE_CH03648
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylR-xylB-xylA -51 6.6 TTTGATTTACGTACATCAAA RHE_CH03650
Rhizobium leguminosarum bv. viciae 3841
Position: -48
Score: 6.57698
Sequence: TTTGATTTACGTACATCAAA
Locus tag: RL4178
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: RL4177
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: RL4176
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylR-xylB-xylA -48 6.6 TTTGATTTACGTACATCAAA RL4178
Rhizobium sp. NGR234
Position: -53
Score: 6.57698
Sequence: TTTGATTTACGTACATCAAA
Locus tag: NGR_c29500
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: NGR_c29490
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: NGR_c29480
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylR-xylB-xylA -53 6.6 TTTGATTTACGTACATCAAA NGR_c29500
Sinorhizobium meliloti 1021
Position: -52
Score: 6.29346
Sequence: TCTGATTTACGTACATCAAA
Locus tag: SMc03165
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: SMc03164
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: SMc03163
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylR-xylB-xylA -52 6.3 TCTGATTTACGTACATCAAA SMc03165
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