Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing comD gene

Properties
Regulog: SPO0590 - Rhodobacterales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Proteobacteria/Alpha
Built upon 21 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -130
Score: 5.11044
Sequence: AATTGTAATGGCTTGCATCG
Position: -107
Score: 5.71418
Sequence: TAATGTAAGGGCTTACACAC
Locus tag: Jann_1398
Name: hisD1
Funciton: putative histidinol dehydrogenase
Locus tag: Jann_1399
Name: gno
Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: Jann_1400
Name: sdh
Funciton: Sorbitol dehydrogenase (EC 1.1.1.14)
Locus tag: Jann_1401
Name: comD
Funciton: Sulfopyruvate decarboxylase - alpha subunit (EC 4.1.1.79)
Locus tag: Jann_1402
Name: comE
Funciton: Sulfopyruvate decarboxylase - beta subunit (EC 4.1.1.79)
Locus tag: Jann_1403
Name: ldh
Funciton: L-lactate dehydrogenase (EC 1.1.2.3)
hisD1-gno-sdh-comD-comE-ldh -130 5.1 AATTGTAATGGCTTGCATCG Jann_1398
-107 5.7 TAATGTAAGGGCTTACACAC
Roseobacter sp. MED193
Position: -298
Score: 6.08106
Sequence: CAATGTAAGGGCTTGCATAA
Position: -275
Score: 6.67598
Sequence: CCATGTAAGCGCTTACATTG
Locus tag: MED193_17079
Name: dctP
Funciton: C4-dicarboxylate ABC transporter, periplasmic component
Locus tag: MED193_17074
Name: dctQ
Funciton: C4-dicarboxylate ABC transporter, small permease component
Locus tag: MED193_17069
Name: dctM
Funciton: C4-dicarboxylate ABC transporter, large permease component
Locus tag: MED193_17064
Name: hisD1
Funciton: putative histidinol dehydrogenase
Locus tag: MED193_17059
Name: gno
Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: MED193_17054
Name: sdh
Funciton: Sorbitol dehydrogenase (EC 1.1.1.14)
Locus tag: MED193_17049
Name: usp
Funciton: Universal stress family protein
Locus tag: MED193_17044
Name: comD
Funciton: Sulfopyruvate decarboxylase - alpha subunit (EC 4.1.1.79)
Locus tag: MED193_17039
Name: comE
Funciton: Sulfopyruvate decarboxylase - beta subunit (EC 4.1.1.79)
Locus tag: MED193_17034
Name: ldh
Funciton: L-lactate dehydrogenase (EC 1.1.2.3)
dctP-dctQ-dctM-hisD1-gno-sdh-usp-comD-comE-ldh -298 6.1 CAATGTAAGGGCTTGCATAA MED193_17079
-275 6.7 CCATGTAAGCGCTTACATTG