Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing usp gene

Properties
Regulog: SPO0590 - Rhodobacterales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Proteobacteria/Alpha
Built upon 21 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -281
Score: 5.7057
Sequence: AATTGTAACAGCTTACATTG
Locus tag: Jann_1349
Name: dctP
Funciton: C4-dicarboxylate ABC transporter, periplasmic component
Locus tag: Jann_1350
Name: dctQ
Funciton: C4-dicarboxylate ABC transporter, small permease component
Locus tag: Jann_1351
Name: dctM
Funciton: C4-dicarboxylate ABC transporter, large permease component
Locus tag: Jann_1352
Name: usp
Funciton: Universal stress family protein
dctP-dctQ-dctM-usp -281 5.7 AATTGTAACAGCTTACATTG Jann_1349
Roseobacter sp. MED193
Position: -298
Score: 6.08106
Sequence: CAATGTAAGGGCTTGCATAA
Position: -275
Score: 6.67598
Sequence: CCATGTAAGCGCTTACATTG
Locus tag: MED193_17079
Name: dctP
Funciton: C4-dicarboxylate ABC transporter, periplasmic component
Locus tag: MED193_17074
Name: dctQ
Funciton: C4-dicarboxylate ABC transporter, small permease component
Locus tag: MED193_17069
Name: dctM
Funciton: C4-dicarboxylate ABC transporter, large permease component
Locus tag: MED193_17064
Name: hisD1
Funciton: putative histidinol dehydrogenase
Locus tag: MED193_17059
Name: gno
Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: MED193_17054
Name: sdh
Funciton: Sorbitol dehydrogenase (EC 1.1.1.14)
Locus tag: MED193_17049
Name: usp
Funciton: Universal stress family protein
Locus tag: MED193_17044
Name: comD
Funciton: Sulfopyruvate decarboxylase - alpha subunit (EC 4.1.1.79)
Locus tag: MED193_17039
Name: comE
Funciton: Sulfopyruvate decarboxylase - beta subunit (EC 4.1.1.79)
Locus tag: MED193_17034
Name: ldh
Funciton: L-lactate dehydrogenase (EC 1.1.2.3)
dctP-dctQ-dctM-hisD1-gno-sdh-usp-comD-comE-ldh -298 6.1 CAATGTAAGGGCTTGCATAA MED193_17079
-275 6.7 CCATGTAAGCGCTTACATTG
Roseovarius nubinhibens ISM
Position: -109
Score: 6.21981
Sequence: AAATGTAAGCGCTTGCAATA
Position: -86
Score: 6.50367
Sequence: CCATGCAAGCGCTTACATTG
Locus tag: ISM_05010
Name: hisD1
Funciton: putative histidinol dehydrogenase
Locus tag: ISM_05015
Name: gno
Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: ISM_05020
Name: sdh
Funciton: Sorbitol dehydrogenase (EC 1.1.1.14)
Locus tag: ISM_05025
Name: usp
Funciton: Universal stress family protein
hisD1-gno-sdh-usp -109 6.2 AAATGTAAGCGCTTGCAATA ISM_05010
-86 6.5 CCATGCAAGCGCTTACATTG
Roseovarius sp. 217
Position: -265
Score: 6.64346
Sequence: ATATGTAAGCGCTTACATTT
Locus tag: ROS217_11206
Name: dctP
Funciton: C4-dicarboxylate ABC transporter, periplasmic component
Locus tag: ROS217_11211
Name: dctQ
Funciton: C4-dicarboxylate ABC transporter, small permease component
Locus tag: ROS217_11216
Name: dctM
Funciton: C4-dicarboxylate ABC transporter, large permease component
Locus tag: ROS217_11221
Name: hisD1
Funciton: putative histidinol dehydrogenase
Locus tag: ROS217_11226
Name: gno
Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: ROS217_11231
Name: sdh
Funciton: Sorbitol dehydrogenase (EC 1.1.1.14)
Locus tag: ROS217_11236
Name: usp
Funciton: Universal stress family protein
Locus tag: ROS217_11241
Name: ldh
Funciton: L-lactate dehydrogenase (EC 1.1.2.3)
dctP-dctQ-dctM-hisD1-gno-sdh-usp-ldh -265 6.6 ATATGTAAGCGCTTACATTT ROS217_11206
Silicibacter pomeroyi DSS-3
Position: -292
Score: 5.60383
Sequence: GCGTGTAAGCGCTTGCATCG
Position: -270
Score: 6.85773
Sequence: AAATGTAAGCGCTTACATTG
Locus tag: SPO0591
Name: dctP
Funciton: C4-dicarboxylate ABC transporter, periplasmic component
Locus tag: SPO0592
Name: dctQ
Funciton: C4-dicarboxylate ABC transporter, small permease component
Locus tag: SPO0593
Name: dctM
Funciton: C4-dicarboxylate ABC transporter, large permease component
Locus tag: SPO0594
Name: hisD1
Funciton: putative histidinol dehydrogenase
Locus tag: SPO0595
Name: gno
Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: SPO0596
Name: sdh
Funciton: Sorbitol dehydrogenase (EC 1.1.1.14)
Locus tag: SPO0597
Name: usp
Funciton: Universal stress family protein
Locus tag: SPO0598
Name: ldh
Funciton: L-lactate dehydrogenase (EC 1.1.2.3)
dctP-dctQ-dctM-hisD1-gno-sdh-usp-ldh -292 5.6 GCGTGTAAGCGCTTGCATCG SPO0591
-270 6.9 AAATGTAAGCGCTTACATTG