Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing GH5 gene

Properties
Regulog: VP2396 - Vibrionales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization
Effector:
Phylum: Proteobacteria/gamma
Built upon 14 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Vibrio parahaemolyticus RIMD 2210633
Position: -183
Score: 5.02844
Sequence: AAGATATTAGCTAAAGATTA
Position: -63
Score: 6.07061
Sequence: AAATTATTAATTAATATATT
Position: -51
Score: 6.35458
Sequence: AATATATTAGCTAATATTAT
Position: -38
Score: 5.87878
Sequence: ATATTATTAGTTAATAATTT
Locus tag: VP2395
Name: GH5
Funciton: Glycoside hydrolase, family 5
Locus tag: VP2394
Name: VP2394
Funciton: Lactose and galactose permease, GPH translocator family
GH5-VP2394 -183 5 AAGATATTAGCTAAAGATTA VP2395
-63 6.1 AAATTATTAATTAATATATT
-51 6.4 AATATATTAGCTAATATTAT
-38 5.9 ATATTATTAGTTAATAATTT
Vibrio shilonii AK1
Position: -71
Score: 5.74967
Sequence: AAATTATTAGTAAATATATT
Position: -59
Score: 6.35458
Sequence: AATATATTAGCTAATATTAT
Position: -46
Score: 5.08585
Sequence: ATATTATTAGTTAAGTTATT
Locus tag: VSAK1_10703
Name: GH5
Funciton: Glycoside hydrolase, family 5
Locus tag: VSAK1_10698
Name: VP2394
Funciton: Lactose and galactose permease, GPH translocator family
GH5-VP2394 -71 5.7 AAATTATTAGTAAATATATT VSAK1_10703
-59 6.4 AATATATTAGCTAATATTAT
-46 5.1 ATATTATTAGTTAAGTTATT
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