Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhaI gene

Properties
Regulog: RhaR - Micrococcineae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Actinobacteria
Built upon 29 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Arthrobacter aurescens TC1
Position: -57
Score: 5.16913
Sequence: AATTTGAATCGTAACAAATG
Position: -43
Score: 5.52457
Sequence: CAAATGAAACGATTCAAAGA
Locus tag: AAur_3714
Name: rhaM
Funciton: L-rhamnose mutarotase
Locus tag: AAur_3715
Name: rhaI
Funciton: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
Locus tag: AAur_3716
Name: rhaEW
Funciton: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: AAur_3717
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
rhaM-rhaI-rhaEW-rhaB -57 5.2 AATTTGAATCGTAACAAATG AAur_3714
-43 5.5 CAAATGAAACGATTCAAAGA
Arthrobacter chlorophenolicus A6
Position: -57
Score: 5.26867
Sequence: ACTTTGAATCGTACCAATGA
Position: -44
Score: 5.52457
Sequence: CCAATGAAACGATTCAAATA
Locus tag: Achl_3108
Name: rhaM
Funciton: L-rhamnose mutarotase
Locus tag: Achl_3107
Name: rhaI
Funciton: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
Locus tag: Achl_3106
Name: rhaEW
Funciton: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: Achl_3105
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
rhaM-rhaI-rhaEW-rhaB -57 5.3 ACTTTGAATCGTACCAATGA Achl_3108
-44 5.5 CCAATGAAACGATTCAAATA
Arthrobacter sp. FB24
Position: -57
Score: 5.46497
Sequence: ACTTTGAATCGTAACAATGA
Position: -44
Score: 5.80469
Sequence: ACAATGAAACGATTCAAAGA
Locus tag: Arth_3307
Name: rhaM
Funciton: L-rhamnose mutarotase
Locus tag: Arth_3306
Name: rhaI
Funciton: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
Locus tag: Arth_3305
Name: rhaEW
Funciton: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: Arth_3304
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
rhaM-rhaI-rhaEW-rhaB -57 5.5 ACTTTGAATCGTAACAATGA Arth_3307
-44 5.8 ACAATGAAACGATTCAAAGA
Beutenbergia cavernae DSM 12333
Position: -63
Score: 5.27968
Sequence: GCTATGAATCGATTCAACCT
Locus tag: Bcav_3624
Name: rhaI
Funciton: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
Locus tag: Bcav_3625
Name: rhaEW
Funciton: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: Bcav_3626
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
rhaI-rhaEW-rhaB -63 5.3 GCTATGAATCGATTCAACCT Bcav_3624
Brachybacterium faecium DSM 4810
Position: -183
Score: 4.62042
Sequence: ATCCTGAGACGTTTCAAGAA
Position: -119
Score: 5.03797
Sequence: GTGTTGAGTCGTTTCAAACA
Locus tag: Bfae_29630
Name: rhaI
Funciton: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
Locus tag: Bfae_29640
Name: rhaEW
Funciton: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: Bfae_29650
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
rhaI-rhaEW-rhaB -183 4.6 ATCCTGAGACGTTTCAAGAA Bfae_29630
-119 5 GTGTTGAGTCGTTTCAAACA