Orthologous regulated operons containing rhiF gene

Properties
Regulog:	RhaR - Frankineae/Propionibacterineae/Pseudonocardiaceae
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Phylum:	Actinobacteria

Built upon 10 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Actinosynnema mirum DSM 43827
Position: -132 Score: 4.74619 Sequence: CCTGTGAACCGATTCAACGC Position: -34 Score: 5.07539 Sequence: GGCTTGAACCGATTCAACCA Locus tag: Amir_0970 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein Locus tag: Amir_0971 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1 Locus tag: Amir_0972 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 Locus tag: Amir_0973 Name: null Funciton: hypothetical protein Locus tag: Amir_0974 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: Amir_0975 Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, LacI family
rhiL-rhiF-rhiG-Amir_0973-rhaM-rhaR	-132	4.7	CCTGTGAACCGATTCAACGC	Amir_0970
	-34	5.1	GGCTTGAACCGATTCAACCA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --